| add_GlyCorrection_values(int node_not_necessarily_glycine, int state, core::PackerEnergy bb_nonglybb_E, core::PackerEnergy bb_glybb_E, core::PackerEnergy sc_nonglybb_E, core::PackerEnergy sc_glybb_E) | core::pack::interaction_graph::SymmOnTheFlyEdge | |
| add_ProCorrection_values(int node_not_necessarily_proline, int state, core::PackerEnergy bb_nonprobb_E, core::PackerEnergy bb_probb_E, core::PackerEnergy sc_nonprobb_E, core::PackerEnergy sc_probb_E) | core::pack::interaction_graph::SymmOnTheFlyEdge | |
| count_dynamic_memory() const override | core::pack::interaction_graph::SymmOnTheFlyEdge | virtual |
| count_static_memory() const override=0 | core::pack::interaction_graph::SymmOnTheFlyEdge | pure virtual |
| declare_energies_final()=0 | core::pack::interaction_graph::EdgeBase | pure virtual |
| edge_weight() const | core::pack::interaction_graph::EdgeBase | inline |
| edge_weight(Real) | core::pack::interaction_graph::EdgeBase | protected |
| EdgeBase(InteractionGraphBase *owner, int first_node_ind, int second_node_ind) | core::pack::interaction_graph::EdgeBase | |
| eval_type(int node_index) const | core::pack::interaction_graph::SymmOnTheFlyEdge | inline |
| eval_types_ | core::pack::interaction_graph::SymmOnTheFlyEdge | private |
| FixedBBEdge(InteractionGraphBase *owner, int first_node_ind, int second_node_ind) | core::pack::interaction_graph::FixedBBEdge | inline |
| force_aa_neighbors(int, int) override | core::pack::interaction_graph::SymmOnTheFlyEdge | inlinevirtual |
| force_all_aa_neighbors() override | core::pack::interaction_graph::SymmOnTheFlyEdge | inlinevirtual |
| get_edges_position_in_nodes_edge_vector(int index) const | core::pack::interaction_graph::EdgeBase | inlineprotected |
| get_first_node_ind() const | core::pack::interaction_graph::EdgeBase | |
| get_glycine_correction(int which_node, int state) const | core::pack::interaction_graph::SymmOnTheFlyEdge | inlineprotected |
| get_glycine_correction_for_node(int node_ind, int state) const | core::pack::interaction_graph::SymmOnTheFlyEdge | inline |
| get_node(int index) const | core::pack::interaction_graph::EdgeBase | inlineprotected |
| get_node(int index) | core::pack::interaction_graph::EdgeBase | inlineprotected |
| get_node_index(int index) const | core::pack::interaction_graph::EdgeBase | inlineprotected |
| get_num_states_for_node(int index) const | core::pack::interaction_graph::EdgeBase | inlineprotected |
| get_otf_node(int which_node) const | core::pack::interaction_graph::SymmOnTheFlyEdge | inlineprotected |
| get_otf_node(int which_node) | core::pack::interaction_graph::SymmOnTheFlyEdge | inlineprotected |
| get_otf_owner() const | core::pack::interaction_graph::SymmOnTheFlyEdge | inlineprotected |
| get_otf_owner() | core::pack::interaction_graph::SymmOnTheFlyEdge | inlineprotected |
| get_other_ind(int callers_index) const | core::pack::interaction_graph::EdgeBase | |
| get_other_node(int callers_index) const | core::pack::interaction_graph::EdgeBase | |
| get_owner() const | core::pack::interaction_graph::EdgeBase | inline |
| get_owner() | core::pack::interaction_graph::EdgeBase | inline |
| get_proline_correction(int which_node, int state) const | core::pack::interaction_graph::SymmOnTheFlyEdge | inlineprotected |
| get_proline_correction_for_node(int node_ind, int state) const | core::pack::interaction_graph::SymmOnTheFlyEdge | inline |
| get_second_node_ind() const | core::pack::interaction_graph::EdgeBase | |
| get_sparse_aa_info(int, int) const override | core::pack::interaction_graph::SymmOnTheFlyEdge | inlinevirtual |
| get_two_body_energy(int const, int const ) const override=0 | core::pack::interaction_graph::SymmOnTheFlyEdge | pure virtual |
| glycine_corrections_ | core::pack::interaction_graph::SymmOnTheFlyEdge | private |
| long_range_interactions_exist() const | core::pack::interaction_graph::SymmOnTheFlyEdge | inline |
| long_range_interactions_exist_ | core::pack::interaction_graph::SymmOnTheFlyEdge | private |
| mark_edge_for_deletion() | core::pack::interaction_graph::EdgeBase | inlineprotected |
| marked_for_deletion() const | core::pack::interaction_graph::EdgeBase | inline |
| note_long_range_interactions_exist() | core::pack::interaction_graph::SymmOnTheFlyEdge | inline |
| note_short_range_interactions_exist() | core::pack::interaction_graph::SymmOnTheFlyEdge | inline |
| prepare_for_simulated_annealing()=0 | core::pack::interaction_graph::EdgeBase | pure virtual |
| proline_corrections_ | core::pack::interaction_graph::SymmOnTheFlyEdge | private |
| residues_adjacent_for_subunit_pair(int which_node, int other_node_subunit, int whichnode_restypegroup, int othernode_restypegroup) const | core::pack::interaction_graph::SymmOnTheFlyEdge | |
| restypegroup_adjacency_ | core::pack::interaction_graph::SymmOnTheFlyEdge | private |
| same_edge(int node1, int node2) const | core::pack::interaction_graph::EdgeBase | |
| set_edge_weight(Real weight)=0 | core::pack::interaction_graph::EdgeBase | pure virtual |
| set_pos_in_node_edgevector(int callers_index, int position) | core::pack::interaction_graph::EdgeBase | |
| set_pos_in_owners_list(std::list< EdgeBase * >::iterator edge_iterator) | core::pack::interaction_graph::EdgeBase | |
| set_residues_adjacent_for_subunit_pair(int which_node, int other_node_subunit) | core::pack::interaction_graph::SymmOnTheFlyEdge | |
| set_sparse_aa_info(ObjexxFCL::FArray2_bool const &) override | core::pack::interaction_graph::SymmOnTheFlyEdge | inlinevirtual |
| short_range_interactions_exist() const | core::pack::interaction_graph::SymmOnTheFlyEdge | inline |
| short_range_interactions_exist_ | core::pack::interaction_graph::SymmOnTheFlyEdge | private |
| SymmOnTheFlyEdge(InteractionGraphBase *owner, int first_node_ind, int second_node_ind) | core::pack::interaction_graph::SymmOnTheFlyEdge | |
| which_node(int node_index) const | core::pack::interaction_graph::EdgeBase | inlineprotected |
| ~EdgeBase() | core::pack::interaction_graph::EdgeBase | virtual |
| ~FixedBBEdge() override | core::pack::interaction_graph::FixedBBEdge | inline |
| ~SymmOnTheFlyEdge() override | core::pack::interaction_graph::SymmOnTheFlyEdge | |