This is the complete list of members for protocols::pockets::GenPharmacophore, including all inherited members.

cluster_KeyFeatures(std::string const &input_filename, std::string const &output_filename) const	protocols::pockets::GenPharmacophore
extract_Hbond_atoms_from_protein_rna_complex(core::pose::Pose const &protein_pose, core::pose::Pose const &rna_pose)	protocols::pockets::GenPharmacophore
extract_rna_rings_from_protein_rna_complex(core::pose::Pose const &protein_pose, core::pose::Pose const &rna_pose)	protocols::pockets::GenPharmacophore
get_ideal_hydrogenBond_atoms(core::pose::Pose const &protein_pose)	protocols::pockets::GenPharmacophore
get_RNAring_sasa(core::conformation::Residue const &rsd, int const &rsdno, core::id::AtomID_Map< core::Real > const &pose_atom_sasa)	protocols::pockets::GenPharmacophore
is_buried_ring(core::conformation::Residue const &rsd, core::Real const &ring_sasa, core::Real const &sasa_cutoff)	protocols::pockets::GenPharmacophore
make_compatible_with_ROCS_custom_ForceField(std::string &input_filename)	protocols::pockets::GenPharmacophore
print_string_to_PDBfile(std::string const &input_filename, std::string const &output_filename) const	protocols::pockets::GenPharmacophore
ReplaceString(std::string subject, const std::string &search, const std::string &replace)	protocols::pockets::GenPharmacophore