| add_atom_definitions(std::string const &definition_str) | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| angle1_func(HydrogenBondingAtom const &a1) const | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| angle1_func_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| angle2_func(HydrogenBondingAtom const &a2) const | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| angle2_func_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| angle_sd_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| apply(core::pose::Pose const &pose) const override | protocols::constraint_generator::HydrogenBondConstraintGenerator | virtual |
| atom_pair_func(HydrogenBondingAtom const &a1, HydrogenBondingAtom const &a2) const | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| atom_pair_func_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| atom_pair_sd_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| AtomNameSet typedef | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| atoms1_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| atoms2_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| bounded_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| choose_atoms(core::conformation::Residue const &rsd, AtomNameSet const &allowed_atoms) const | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| class_name() | protocols::constraint_generator::HydrogenBondConstraintGenerator | inlinestatic |
| protocols::constraint_generator::ConstraintGenerator::class_name() const | protocols::constraint_generator::ConstraintGenerator | |
| clone() const override | protocols::constraint_generator::HydrogenBondConstraintGenerator | virtual |
| compute_valid_atoms(HydrogenBondingAtoms &valid_atoms, core::conformation::Residue const &rsd) const | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| ConstraintGenerator(std::string const &class_name) | protocols::constraint_generator::ConstraintGenerator | |
| create_residue_constraint(core::conformation::Residue const &rsd1, core::conformation::Residue const &rsd2) const | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| create_residue_constraint(core::conformation::Residue const &rsd1, core::conformation::Residue const &rsd2, HydrogenBondingAtoms const &atoms1, HydrogenBondingAtoms const &atoms2) const | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| create_residue_constraint(core::id::AtomID const &atomid1, core::id::AtomID const &parent_atomid1, core::id::AtomID const &parent2_atomid1, core::id::AtomID const &atomid2, core::id::AtomID const &parent_atomid2, core::id::AtomID const &parent2_atomid2, HydrogenBondingAtom const &a1, HydrogenBondingAtom const &a2) const | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| dihedral_func(core::Real const dihedral_value) const | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| HydrogenBondConstraintGenerator() | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| id() const | protocols::constraint_generator::ConstraintGenerator | |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) | protocols::constraint_generator::ConstraintGenerator | |
| parse_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) override | protocols::constraint_generator::HydrogenBondConstraintGenerator | virtual |
| provide_citation_info(basic::citation_manager::CitationCollectionList &citations) const override | protocols::constraint_generator::HydrogenBondConstraintGenerator | virtual |
| provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | protocols::constraint_generator::HydrogenBondConstraintGenerator | static |
| selector1_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| selector2_ | protocols::constraint_generator::HydrogenBondConstraintGenerator | private |
| set_angle1_func(std::string const &func_def) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_angle1_func(core::scoring::func::FuncOP angle_func) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_angle2_func(std::string const &func_def) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_angle2_func(core::scoring::func::FuncOP angle_func) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_angle_sd(core::Real const sd) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_atom_pair_func(std::string const &func_def) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_atom_pair_func(core::scoring::func::FuncOP atompairfunc) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_atom_pair_sd(core::Real const sd) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_atoms1(std::string const &atoms_str) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_atoms1(AtomNameSet const &atoms) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_atoms2(std::string const &atoms_str) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_atoms2(AtomNameSet const &atoms) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_bounded(bool const bounded) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_id(std::string const &id) | protocols::constraint_generator::ConstraintGenerator | |
| set_residue_selector1(core::select::residue_selector::ResidueSelectorCOP selector) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| set_residue_selector2(core::select::residue_selector::ResidueSelectorCOP selector) | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
| ~ConstraintGenerator() override | protocols::constraint_generator::ConstraintGenerator | |
| ~HydrogenBondConstraintGenerator() override | protocols::constraint_generator::HydrogenBondConstraintGenerator | |
1.8.7