NatbiasSecondaryStructureEnergy.cc File Reference

native biased centroid score for secondary structures More...

#include <protocols/fldsgn/potentials/sspot/NatbiasSecondaryStructureEnergy.hh>
#include <protocols/fldsgn/potentials/sspot/NatbiasSecondaryStructureEnergyCreator.hh>
#include <protocols/fldsgn/topology/SS_Info2.hh>
#include <protocols/fldsgn/topology/StrandPairing.hh>
#include <protocols/fldsgn/topology/HelixPairing.hh>
#include <protocols/fldsgn/topology/HSSTriplet.hh>
#include <protocols/fldsgn/potentials/sspot/NatbiasHelicesSheetPotential.hh>
#include <protocols/fldsgn/potentials/sspot/NatbiasHelixPairPotential.hh>
#include <protocols/fldsgn/potentials/sspot/NatbiasStrandPairPotential.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/methods/EnergyMethod.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::fldsgn
	protocols::fldsgn::potentials
	protocols::fldsgn::potentials::sspot

Functions
static basic::Tracer	TR ("protocols.fldsgn.potentials.sspot.NatbiasSecondaryStructureEnergy", basic::t_info)

Detailed Description

native biased centroid score for secondary structures

Author

Nobuyasu Koga ( nobuy.nosp@m.asu@.nosp@m.uw.ed.nosp@m.u )

Function Documentation

static basic::Tracer TR ( "protocols.fldsgn.potentials.sspot.NatbiasSecondaryStructureEnergy"  , basic::t_info    )

static