protocols::simple_filters::SAXSScoreFilter Class Reference

#include <SAXSScoreFilter.hh>

Inheritance diagram for protocols::simple_filters::SAXSScoreFilter:

Public Member Functions
	SAXSScoreFilter ()
	c-tor and d-tor More...
	~SAXSScoreFilter () override=default
filters::FilterOP	clone () const override
filters::FilterOP	fresh_instance () const override
bool	apply (core::pose::Pose const &pose) const override
	Returns true if the given pose passes the filter, false otherwise. More...
std::string	name () const override
core::Real	cutoff () const
void	cutoff (core::Real cutoff_value)
core::Real	recent_score ()
Public Member Functions inherited from protocols::filters::Filter
	Filter ()
	Filter (std::string const &)
	Filter (Filter const &)
	~Filter () override
virtual void	report (std::ostream &, core::pose::Pose const &) const
virtual core::Real	report_sm (core::pose::Pose const &) const
	used to report filter internals through a score or silent file More...
virtual std::string	get_type () const
std::string	get_user_defined_name () const
void	set_user_defined_name (std::string const &name)
virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual void	parse_my_tag (utility::tag::TagCOP, basic::datacache::DataMap &)
	Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing. More...
virtual core::Real	score (core::pose::Pose &pose)
virtual void	provide_citation_info (basic::citation_manager::CitationCollectionList &) const
	Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Private Attributes
core::energy_methods::SAXSEnergyFA	score
core::Real	score_value_
core::Real	cutoff_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Constructor & Destructor Documentation

protocols::simple_filters::SAXSScoreFilter::SAXSScoreFilter

(

)

c-tor and d-tor

References cutoff_, and score_value_.

protocols::simple_filters::SAXSScoreFilter::~SAXSScoreFilter ( )

overridedefault

Member Function Documentation

bool protocols::simple_filters::SAXSScoreFilter::apply ( core::pose::Pose const &  pose ) const

overridevirtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References core::pack::task::TaskFactory::create_packer_task(), cutoff_, core::chemical::FULL_ATOM_t, core::scoring::get_score_function(), core::pose::Pose::is_fullatom(), core::pack::pack_rotamers(), protocols::antibody::design::repack, core::optimization::AtomTreeMinimizer::run(), score, score_value_, core::kinematics::MoveMap::set_bb(), core::kinematics::MoveMap::set_chi(), core::util::switch_to_residue_type_set(), core::energy_methods::SAXSEnergy::total_energy(), and protocols::simple_filters::tr().

filters::FilterOP protocols::simple_filters::SAXSScoreFilter::clone ( ) const

inlineoverridevirtual

Implements protocols::filters::Filter.

core::Real protocols::simple_filters::SAXSScoreFilter::cutoff ( ) const

inline

References cutoff_.

void protocols::simple_filters::SAXSScoreFilter::cutoff ( core::Real  cutoff_value )

inline

References cutoff_.

filters::FilterOP protocols::simple_filters::SAXSScoreFilter::fresh_instance ( ) const

inlineoverridevirtual

Implements protocols::filters::Filter.

std::string protocols::simple_filters::SAXSScoreFilter::name ( ) const

inlineoverridevirtual

Reimplemented from protocols::filters::Filter.

core::Real protocols::simple_filters::SAXSScoreFilter::recent_score ( )

inline

References score_value_.

Member Data Documentation

core::Real protocols::simple_filters::SAXSScoreFilter::cutoff_

private

Referenced by apply(), cutoff(), and SAXSScoreFilter().

core::energy_methods::SAXSEnergyFA protocols::simple_filters::SAXSScoreFilter::score

private

Referenced by apply().

core::Real protocols::simple_filters::SAXSScoreFilter::score_value_

mutableprivate

Referenced by apply(), recent_score(), and SAXSScoreFilter().

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The documentation for this class was generated from the following files:

• src/protocols/simple_filters/SAXSScoreFilter.hh
• src/protocols/simple_filters/SAXSScoreFilter.cc