| add_pass_through(ResidueTypeCOP residue_type) | core::chemical::ResidueTypeSetCache | |
| add_prohibited(std::string const &rsd_name) | core::chemical::ResidueTypeSetCache | |
| add_residue_type(ResidueTypeCOP residue_type) | core::chemical::ResidueTypeSetCache | |
| all_types_with_variants_aa_already_cached(AA aa, utility::vector1< std::string > const &variants, utility::vector1< VariantType > const &exceptions) const | core::chemical::ResidueTypeSetCache | |
| all_types_with_variants_residuetypecops_already_cached(ResidueTypeCOP base_type, utility::vector1< VariantType > const &variants, utility::vector1< std::string > const &variant_strings, utility::vector1< VariantType > const &exceptions, bool const no_metapatches) const | core::chemical::ResidueTypeSetCache | |
| cache_all_types_with_variants_aa(AA aa, utility::vector1< std::string > const &variants, utility::vector1< VariantType > const &exceptions, ResidueTypeCOPs cached_types) | core::chemical::ResidueTypeSetCache | |
| cache_all_types_with_variants_residuetypecops(ResidueTypeCOP base_type, utility::vector1< VariantType > const &variants, utility::vector1< std::string > const &variant_strings, utility::vector1< VariantType > const &exceptions, bool const no_metapatches, ResidueTypeCOPs const &types_to_cache) | core::chemical::ResidueTypeSetCache | |
| cache_up_to_date_ | core::chemical::ResidueTypeSetCache | private |
| cached_aa_variants_map_ | core::chemical::ResidueTypeSetCache | private |
| cached_restype_variants_map_ | core::chemical::ResidueTypeSetCache | private |
| clear_cached_maps() | core::chemical::ResidueTypeSetCache | |
| clone(ResidueTypeSet const &rsd_type_set) const | core::chemical::ResidueTypeSetCache | |
| has_generated_residue_type(ResidueTypeCOP rsd_type) const | core::chemical::ResidueTypeSetCache | |
| has_generated_residue_type(std::string const &rsd_name) const | core::chemical::ResidueTypeSetCache | |
| has_restype_with_name3(std::string const &name3) const | core::chemical::ResidueTypeSetCache | |
| interchangeability_group_generated_by_base_residue_name() | core::chemical::ResidueTypeSetCache | |
| interchangeability_group_generated_by_base_residue_name_ | core::chemical::ResidueTypeSetCache | private |
| is_pass_through(std::string const &name_in) | core::chemical::ResidueTypeSetCache | |
| is_prohibited(std::string const &rsd_name) const | core::chemical::ResidueTypeSetCache | |
| maps_up_to_date() const | core::chemical::ResidueTypeSetCache | inline |
| name3_generated_by_base_residue_name() | core::chemical::ResidueTypeSetCache | |
| name3_generated_by_base_residue_name_ | core::chemical::ResidueTypeSetCache | private |
| name_map(std::string const &name_in) const | core::chemical::ResidueTypeSetCache | |
| name_map_ | core::chemical::ResidueTypeSetCache | private |
| name_map_or_null(std::string const &name_in) const | core::chemical::ResidueTypeSetCache | |
| pass_throughs_ | core::chemical::ResidueTypeSetCache | private |
| prohibited_types_ | core::chemical::ResidueTypeSetCache | private |
| regenerate_cached_maps() | core::chemical::ResidueTypeSetCache | private |
| remove_residue_type(std::string const &name) | core::chemical::ResidueTypeSetCache | |
| ResidueTypeSetCache(ResidueTypeSet const &rsd_type_set) | core::chemical::ResidueTypeSetCache | |
| ResidueTypeSetCache()=delete | core::chemical::ResidueTypeSetCache | private |
| ResidueTypeSetCache(ResidueTypeSetCache const &)=delete | core::chemical::ResidueTypeSetCache | private |
| retrieve_all_types_with_variants_aa(AA aa, utility::vector1< std::string > const &variants, utility::vector1< VariantType > const &exceptions) const | core::chemical::ResidueTypeSetCache | |
| retrieve_all_types_with_variants_residuetypecops(ResidueTypeCOP base_type, utility::vector1< VariantType > const &variants, utility::vector1< std::string > const &variant_strings, utility::vector1< VariantType > const &exceptions, bool const no_metapatches) const | core::chemical::ResidueTypeSetCache | |
| rsd_type_set_ | core::chemical::ResidueTypeSetCache | private |
| update_residue_type(ResidueTypeCOP residue_type_original, ResidueTypeCOP residue_type_new) | core::chemical::ResidueTypeSetCache | |
| ~ResidueTypeSetCache() override | core::chemical::ResidueTypeSetCache | |
1.8.7