RNAIdealizeMover.cc File Reference

Slowly accomodate movement from non-ideal to ideal bond lengths and angles by repeated minimization. More...

#include <protocols/rna/movers/RNAIdealizeMover.hh>
#include <protocols/rna/movers/RNAIdealizeMoverCreator.hh>
#include <core/pose/Pose.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/util.hh>
#include <core/pose/rna/RNA_SuiteName.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/chemical/ResidueType.hh>
#include <core/chemical/rna/util.hh>
#include <core/chemical/ChemicalManager.fwd.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/constraints/CoordinateConstraint.hh>
#include <core/scoring/constraints/AtomPairConstraint.hh>
#include <core/scoring/constraints/AngleConstraint.hh>
#include <core/scoring/constraints/DihedralConstraint.hh>
#include <core/scoring/func/HarmonicFunc.hh>
#include <core/scoring/func/CircularHarmonicFunc.hh>
#include <core/scoring/func/FlatHarmonicFunc.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/AtomTree.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/tree/Atom.hh>
#include <core/id/AtomID.hh>
#include <protocols/stepwise/sampler/rna/RNA_KIC_Sampler.hh>
#include <protocols/stepwise/monte_carlo/mover/StepWiseMove.hh>
#include <protocols/stepwise/monte_carlo/options/StepWiseMonteCarloOptions.hh>
#include <protocols/stepwise/monte_carlo/mover/StepWiseMasterMover.hh>
#include <protocols/stepwise/modeler/rna/o2prime/O2PrimePacker.hh>
#include <protocols/stepwise/monte_carlo/mover/TransientCutpointHandler.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <numeric/xyzVector.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/angle.functions.hh>
#include <numeric/conversions.hh>
#include <numeric/random/random.hh>
#include <basic/Tracer.hh>
#include <utility/tag/Tag.hh>
#include <iostream>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::rna
	protocols::rna::movers

Functions
static basic::Tracer	TR ("protocols.rna.movers.RNAIdealizeMover")
std::ostream &	protocols::rna::movers::operator<< (std::ostream &os, RNAIdealizeMover const &mover)

Detailed Description

Slowly accomodate movement from non-ideal to ideal bond lengths and angles by repeated minimization.

Author

Andy Watkins (amw57.nosp@m.9@ny.nosp@m.u.edu)

Function Documentation

static basic::Tracer TR ( "protocols.rna.movers.RNAIdealizeMover"  )

static