protocols::legacy_sewing::scoring::LegacyPartnerMotifScorer Class Reference

#include <LegacyPartnerMotifScorer.hh>

Inheritance diagram for protocols::legacy_sewing::scoring::LegacyPartnerMotifScorer:

Public Member Functions
	LegacyPartnerMotifScorer ()
	default construct More...
	~LegacyPartnerMotifScorer () override
core::Real	score (AssemblyCOP assembly) override
core::Real	interface_motif_score (AssemblyCOP assembly)
Public Member Functions inherited from protocols::legacy_sewing::scoring::LegacyMotifScorer
	LegacyMotifScorer ()
	default construct More...
	~LegacyMotifScorer () override
core::Real	norm_motif_score (AssemblyCOP assembly)
core::Real	full_motif_score (AssemblyCOP assembly)
numeric::xyzTransform< core::Real >	get_stub (utility::vector1< SewSegment > const &segments, core::Size segment_num, core::Size resnum) const
core::Real	get_score (numeric::xyzTransform< core::Real > stub1, char ss1, char aa1, numeric::xyzTransform< core::Real > stub2, char ss2, char aa2) const
void	dump_motif (AssemblyCOP assembly) const
Public Member Functions inherited from protocols::legacy_sewing::scoring::LegacyAssemblyScorer
	LegacyAssemblyScorer ()
	default construct More...
	~LegacyAssemblyScorer () override

Additional Inherited Members
Protected Attributes inherited from protocols::legacy_sewing::scoring::LegacyMotifScorer
core::scoring::motif::MotifHashManager &	mman_
core::chemical::ResidueTypeSetCOP	res_type_set_

Constructor & Destructor Documentation

protocols::legacy_sewing::scoring::LegacyPartnerMotifScorer::LegacyPartnerMotifScorer

(

)

default construct

protocols::legacy_sewing::scoring::LegacyPartnerMotifScorer::~LegacyPartnerMotifScorer ( )

inlineoverride

Member Function Documentation

core::Real protocols::legacy_sewing::scoring::LegacyPartnerMotifScorer::interface_motif_score

(

AssemblyCOP

assembly

)

use Will's Motif score to calculate the motif score for the entire Assembly

References protocols::simple_filters::dssp(), core::pose::motif::get_backbone_reference_frame(), protocols::legacy_sewing::scoring::LegacyMotifScorer::get_score(), protocols::legacy_sewing::scoring::LegacyMotifScorer::get_stub(), core::scoring::dssp::Dssp::insert_ss_into_pose(), protocols::legacy_sewing::scoring::LegacyMotifScorer::res_type_set_, and score().

Referenced by score().

core::Real protocols::legacy_sewing::scoring::LegacyPartnerMotifScorer::score ( AssemblyCOP  assembly )

overridevirtual

Use the negative normalized motif score

Reimplemented from protocols::legacy_sewing::scoring::LegacyMotifScorer.

References interface_motif_score().

Referenced by interface_motif_score().

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The documentation for this class was generated from the following files:

• src/protocols/legacy_sewing/scoring/LegacyPartnerMotifScorer.hh
• src/protocols/legacy_sewing/scoring/LegacyPartnerMotifScorer.cc