core::scoring::constraints::BackboneStubLinearConstraint Member List

This is the complete list of members for core::scoring::constraints::BackboneStubLinearConstraint, including all inherited members.

atom(Size const index) const override	core::scoring::constraints::BackboneStubLinearConstraint	inlinevirtual
atom_ids_	core::scoring::constraints::BackboneStubLinearConstraint	private
AtomID typedef	core::scoring::constraints::Constraint
BackboneStubLinearConstraint(pose::Pose const &pose, Size const seqpos, AtomID const &fixed_atom_id, conformation::Residue const &target_rsd, core::Real const &superposition_bonus, core::Real const &CB_force_constant)	core::scoring::constraints::BackboneStubLinearConstraint
C_atom_id_	core::scoring::constraints::BackboneStubLinearConstraint	private
C_N_target_	core::scoring::constraints::BackboneStubLinearConstraint	private
C_target_	core::scoring::constraints::BackboneStubLinearConstraint	private
CA_atom_id_	core::scoring::constraints::BackboneStubLinearConstraint	private
CA_target_	core::scoring::constraints::BackboneStubLinearConstraint	private
CB_atom_id_	core::scoring::constraints::BackboneStubLinearConstraint	private
CB_CA_target_	core::scoring::constraints::BackboneStubLinearConstraint	private
CB_force_constant_	core::scoring::constraints::BackboneStubLinearConstraint	private
CB_target_	core::scoring::constraints::BackboneStubLinearConstraint	private
choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &)	core::scoring::constraints::Constraint	virtual
clone() const override	core::scoring::constraints::BackboneStubLinearConstraint	virtual
core::scoring::constraints::Constraint::clone(func::FuncOP) const	core::scoring::constraints::Constraint	virtual
Constraint(ScoreType const &t)	core::scoring::constraints::Constraint
dist(core::scoring::func::XYZ_Func const &) const override	core::scoring::constraints::BackboneStubLinearConstraint	inlinevirtual
core::scoring::constraints::Constraint::dist(core::pose::Pose const &) const	core::scoring::constraints::Constraint	virtual
effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const	core::scoring::constraints::Constraint	virtual
fill_f1_f2(AtomID const &atom, func::XYZ_Func const &xyz, Vector &F1, Vector &F2, EnergyMap const &weights) const override	core::scoring::constraints::BackboneStubLinearConstraint	virtual
fixed_atom_id_	core::scoring::constraints::BackboneStubLinearConstraint	private
fixed_reference_point_	core::scoring::constraints::BackboneStubLinearConstraint	private
get_func() const	core::scoring::constraints::Constraint	virtual
N_atom_id_	core::scoring::constraints::BackboneStubLinearConstraint	private
N_target_	core::scoring::constraints::BackboneStubLinearConstraint	private
natoms() const override	core::scoring::constraints::BackboneStubLinearConstraint	inlinevirtual
operator!=(Constraint const &other) const	core::scoring::constraints::Constraint
operator==(Constraint const &other) const override	core::scoring::constraints::BackboneStubLinearConstraint	virtual
read_constraint(std::istream &, core::pose::Pose const &)	core::scoring::constraints::Constraint	virtual
read_data(std::istream &)	core::scoring::constraints::Constraint	virtual
read_def(std::istream &, pose::Pose const &, core::scoring::func::FuncFactory const &)	core::scoring::constraints::Constraint	virtual
remap_resid(core::id::SequenceMapping const &) const	core::scoring::constraints::Constraint	virtual
remapped_clone(pose::Pose const &src, pose::Pose const &dest, id::SequenceMappingCOP map=nullptr) const override	core::scoring::constraints::BackboneStubLinearConstraint	virtual
residues() const	core::scoring::constraints::Constraint	virtual
same_type_as_me(Constraint const &other) const override	core::scoring::constraints::BackboneStubLinearConstraint	virtual
score(func::XYZ_Func const &xyz_func, EnergyMap const &weights, EnergyMap &emap) const override	core::scoring::constraints::BackboneStubLinearConstraint	virtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose) const	core::scoring::constraints::Constraint	virtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose, EnergyMap const &weights) const	core::scoring::constraints::Constraint	virtual
score_type() const	core::scoring::constraints::Constraint	inline
seqpos() const	core::scoring::constraints::BackboneStubLinearConstraint
seqpos_	core::scoring::constraints::BackboneStubLinearConstraint	private
setup_for_derivatives(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	virtual
setup_for_scoring(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	virtual
show(std::ostream &out) const override	core::scoring::constraints::BackboneStubLinearConstraint	virtual
show_def(std::ostream &, pose::Pose const &) const	core::scoring::constraints::Constraint	virtual
show_violations(std::ostream &out, pose::Pose const &, Size, Real threshold=1) const	core::scoring::constraints::Constraint	virtual
steal_def(pose::Pose const &)	core::scoring::constraints::Constraint	virtual
superposition_bonus_	core::scoring::constraints::BackboneStubLinearConstraint	private
to_string() const	core::scoring::constraints::Constraint
type() const override	core::scoring::constraints::BackboneStubLinearConstraint	inlinevirtual
~BackboneStubLinearConstraint() override	core::scoring::constraints::BackboneStubLinearConstraint	inline
~Constraint() override	core::scoring::constraints::Constraint