for planning ideal pieces of structures More...

#include <DeNovoArchitect.hh>

Inheritance diagram for protocols::denovo_design::architects::DeNovoArchitect:

Public Types
typedef components::StructureDataOP	StructureDataOP

Public Member Functions
	DeNovoArchitect (std::string const &id)

	~DeNovoArchitect () override

std::string	type () const override=0
	simply returns the name of this type of architect More...

virtual DeNovoArchitectOP	clone () const =0

virtual components::StructureDataOP	design (core::pose::Pose const &pose, core::Real &random) const =0

components::StructureDataOP	apply (core::pose::Pose const &pose) const

Public Member Functions inherited from protocols::denovo_design::architects::StructureArchitect
	StructureArchitect (std::string const &id)

	~StructureArchitect () override

void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data)

std::string const &	id () const

void	set_id (std::string const &new_id)

Static Public Member Functions
static void	add_common_denovo_architect_attributes (utility::tag::AttributeList &attlist)

Static Public Member Functions inherited from protocols::denovo_design::architects::StructureArchitect
static void	attributes_for_parse_my_tag (utility::tag::AttributeList &attlist)

Static Public Attributes
static std::string const	DATA_MAP_NAME = "DeNovoArchitects"

Protected Member Functions
void	parse_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data) override=0
	Configuration by XML. More...

Detailed Description

for planning ideal pieces of structures

Derived classes must still implment their own parse_tag() and type() functions. This base handles the apply() virtual, though. In parse_tag(), derived classes MUST be sure to set the motif list.

Member Typedef Documentation

typedef components::StructureDataOP protocols::denovo_design::architects::DeNovoArchitect::StructureDataOP

Constructor & Destructor Documentation

protocols::denovo_design::architects::DeNovoArchitect::DeNovoArchitect ( std::string const & id )

protocols::denovo_design::architects::DeNovoArchitect::~DeNovoArchitect ( )

overridedefault

Member Function Documentation

void protocols::denovo_design::architects::DeNovoArchitect::add_common_denovo_architect_attributes ( utility::tag::AttributeList & attlist )

static

Referenced by protocols::denovo_design::architects::PoseArchitect::provide_xml_schema(), protocols::denovo_design::architects::HelixArchitect::provide_xml_schema(), protocols::denovo_design::architects::BlueprintArchitect::provide_xml_schema(), protocols::denovo_design::architects::CompoundArchitect::provide_xml_schema(), protocols::denovo_design::architects::MotifArchitect::provide_xml_schema(), protocols::denovo_design::architects::BetaSheetArchitect::provide_xml_schema(), and protocols::denovo_design::architects::StrandArchitect::provide_xml_schema().

components::StructureDataOP protocols::denovo_design::architects::DeNovoArchitect::apply ( core::pose::Pose const & pose ) const

References design(), protocols::rigid::random, and core::scoring::rg.

virtual DeNovoArchitectOP protocols::denovo_design::architects::DeNovoArchitect::clone ( ) const

pure virtual

Implemented in protocols::denovo_design::architects::BetaSheetArchitect, protocols::denovo_design::architects::StrandArchitect, protocols::denovo_design::architects::MotifArchitect, protocols::denovo_design::architects::CompoundArchitect, protocols::denovo_design::architects::BlueprintArchitect, protocols::denovo_design::architects::HelixArchitect, and protocols::denovo_design::architects::PoseArchitect.

Referenced by protocols::denovo_design::architects::CompoundArchitect::add_architect(), and protocols::denovo_design::movers::FoldArchitectMover::set_architect().

virtual components::StructureDataOP protocols::denovo_design::architects::DeNovoArchitect::design	(	core::pose::Pose const &	pose,
		core::Real &	random
	)		const