protocols::forge::remodel::RemodelDesignMover Member List

This is the complete list of members for protocols::forge::remodel::RemodelDesignMover, including all inherited members.

apply(Pose &pose) override	protocols::forge::remodel::RemodelDesignMover	virtual
archived_starting_task_	protocols::forge::remodel::RemodelDesignMover	private
check_state()	protocols::forge::remodel::RemodelDesignMover
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::forge::remodel::RemodelDesignMover	virtual
create()	protocols::moves::Mover	virtual
find_disulfides_in_the_neighborhood(Pose &pose, utility::vector1< std::pair< core::Size, core::Size > > &disulf_partners, const core::Energy &match_rt_limit, const core::Size &rosetta_scripts_min_loop, const bool &rosetta_scripts_include_current_ds, const bool &rosetta_scripts_keep_current_ds, const bool &relax_bb_for_disulf, const bool &use_match_rt, const bool &use_disulf_fa_score, const core::Real disulf_fa_max)	protocols::forge::remodel::RemodelDesignMover
fresh_instance() const override	protocols::forge::remodel::RemodelDesignMover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::forge::remodel::RemodelDesignMover	virtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
make_disulfide(Pose &pose, utility::vector1< std::pair< core::Size, core::Size > > &disulf_partners, core::kinematics::MoveMapOP mm)	protocols::forge::remodel::RemodelDesignMover
make_disulfide_fast(Pose &pose, utility::vector1< std::pair< core::Size, core::Size > > &disulf_partners)	protocols::forge::remodel::RemodelDesignMover
mode1_1_packertask(Pose &pose)	protocols::forge::remodel::RemodelDesignMover
mode1_packertask(Pose &pose)	protocols::forge::remodel::RemodelDesignMover
mode2_packertask(Pose &pose)	protocols::forge::remodel::RemodelDesignMover
mode3_packertask(Pose &pose)	protocols::forge::remodel::RemodelDesignMover
mode4_packertask(Pose &pose)	protocols::forge::remodel::RemodelDesignMover
mode5_packertask(Pose &pose)	protocols::forge::remodel::RemodelDesignMover
mode6_packertask(Pose &pose)	protocols::forge::remodel::RemodelDesignMover
MoveMap typedef	protocols::forge::remodel::RemodelDesignMover
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
MoverOP typedef	protocols::forge::remodel::RemodelDesignMover
name()	protocols::moves::Mover	inlinestatic
non_default_positions_	protocols::forge::remodel::RemodelDesignMover	private
PackerTask typedef	protocols::forge::remodel::RemodelDesignMover
PackerTaskOP typedef	protocols::forge::remodel::RemodelDesignMover
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
Pose typedef	protocols::forge::remodel::RemodelDesignMover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
Real typedef	protocols::forge::remodel::RemodelDesignMover
reduce_task(Pose &pose, PackerTaskOP &task, bool core, bool boundary, bool surface)	protocols::forge::remodel::RemodelDesignMover
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
remodel_data_	protocols::forge::remodel::RemodelDesignMover	private
RemodelData typedef	protocols::forge::remodel::RemodelDesignMover
RemodelDesignMover()	protocols::forge::remodel::RemodelDesignMover
RemodelDesignMover(RemodelData const &remodel_data, RemodelWorkingSet const &working_model, ScoreFunctionOP const &sfxn)	protocols::forge::remodel::RemodelDesignMover
RemodelWorkingSet typedef	protocols::forge::remodel::RemodelDesignMover
reset_status()	protocols::moves::Mover
run_calculator(core::pose::Pose const &pose, std::string const &calculator, std::string const &calculation, utility::vector1_bool &residues)	protocols::forge::remodel::RemodelDesignMover	private
score_fxn_	protocols::forge::remodel::RemodelDesignMover	private
scorefunction(ScoreFunctionOP const &sfxn)	protocols::forge::remodel::RemodelDesignMover
ScoreFunction typedef	protocols::forge::remodel::RemodelDesignMover
ScoreFunctionOP typedef	protocols::forge::remodel::RemodelDesignMover
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_state(std::string state_tag)	protocols::forge::remodel::RemodelDesignMover
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Size typedef	protocols::forge::remodel::RemodelDesignMover
state_	protocols::forge::remodel::RemodelDesignMover	private
Strings typedef	protocols::moves::Mover
Super typedef	protocols::forge::remodel::RemodelDesignMover	private
TagCOP typedef	protocols::moves::Mover
task()	protocols::forge::remodel::RemodelDesignMover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
working_model_	protocols::forge::remodel::RemodelDesignMover	private
~RemodelDesignMover() override	protocols::forge::remodel::RemodelDesignMover