protocols::docking::TemperedDocking Member List

This is the complete list of members for protocols::docking::TemperedDocking, including all inherited members.

add_jump(core::SSize const jump_number)	protocols::docking::TemperedDocking	inline
apply(core::pose::Pose &pose) override	protocols::docking::TemperedDocking	virtual
autofoldtree_	protocols::docking::TemperedDocking	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::docking::TemperedDocking	virtual
copy(TemperedDocking &lhs, TemperedDocking const &rhs)	protocols::docking::TemperedDocking	protected
create()	protocols::moves::Mover	virtual
docking_constraint_	protocols::docking::TemperedDocking	private
docking_scorefxn_high_	protocols::docking::TemperedDocking	private
docking_scorefxn_low_	protocols::docking::TemperedDocking	private
docking_scorefxn_output_	protocols::docking::TemperedDocking	private
docking_scorefxn_pack_	protocols::docking::TemperedDocking	private
finalize_setup(core::pose::Pose &pose)	protocols::docking::TemperedDocking	protected
first_apply_with_current_setup_	protocols::docking::TemperedDocking	private
flags_and_objects_are_in_sync_	protocols::docking::TemperedDocking	private
fold_tree_	protocols::docking::TemperedDocking	private
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::docking::TemperedDocking	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
init(DockJumps const movable_jumps, core::scoring::ScoreFunctionCOP docking_score_low, core::scoring::ScoreFunctionCOP docking_score_high)	protocols::docking::TemperedDocking	protected
init_from_options()	protocols::docking::TemperedDocking	protected
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
movable_jumps()	protocols::docking::TemperedDocking	inline
movable_jumps() const	protocols::docking::TemperedDocking	inline
movable_jumps_	protocols::docking::TemperedDocking	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
n_cycles_	protocols::docking::TemperedDocking	private
name()	protocols::moves::Mover	inlinestatic
operator<<(std::ostream &out, const TemperedDocking &dp)	protocols::docking::TemperedDocking	friend
operator=(TemperedDocking const &rhs)	protocols::docking::TemperedDocking
options_registered_	protocols::docking::TemperedDocking	privatestatic
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &) override	protocols::docking::TemperedDocking	virtual
partners() const	protocols::docking::TemperedDocking	inline
partners_	protocols::docking::TemperedDocking	private
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
previous_sequence_	protocols::docking::TemperedDocking	private
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
rb_mover_	protocols::docking::TemperedDocking	private
recover_sidechains_filename_	protocols::docking::TemperedDocking	private
register_options()	protocols::docking::TemperedDocking	static
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
rigid_rot_mag_	protocols::docking::TemperedDocking	private
rigid_trans_mag_	protocols::docking::TemperedDocking	private
sampler_	protocols::docking::TemperedDocking	private
sc_min_	protocols::docking::TemperedDocking	private
set_autofoldtree(bool setting)	protocols::docking::TemperedDocking	inline
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_defaults()	protocols::docking::TemperedDocking
set_highres_scorefxn(core::scoring::ScoreFunctionOP docking_scorefxn_high)	protocols::docking::TemperedDocking
set_highres_scorefxn(core::scoring::ScoreFunctionCOP docking_scorefxn_high, core::scoring::ScoreFunctionCOP docking_scorefxn_pack)	protocols::docking::TemperedDocking
set_highres_scorefxn(core::scoring::ScoreFunctionCOP docking_scorefxn_high, core::scoring::ScoreFunctionCOP docking_scorefxn_pack, core::scoring::ScoreFunctionCOP docking_scorefxn_output)	protocols::docking::TemperedDocking
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_lowres_scorefxn(core::scoring::ScoreFunctionOP docking_scorefxn_low)	protocols::docking::TemperedDocking
set_movable_jumps(DockJumps const &setting)	protocols::docking::TemperedDocking	inline
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_partners(std::string const &setting)	protocols::docking::TemperedDocking	inline
set_sc_min(bool sc_min)	protocols::docking::TemperedDocking
set_type(std::string const &setting)	protocols::moves::Mover	inline
set_use_constraints(bool setting)	protocols::docking::TemperedDocking
setup_objects()	protocols::docking::TemperedDocking	protected
show(std::ostream &out=std::cout) const override	protocols::docking::TemperedDocking	virtual
Strings typedef	protocols::moves::Mover
sync_objects_with_flags()	protocols::docking::TemperedDocking
TagCOP typedef	protocols::moves::Mover
TemperedDocking()	protocols::docking::TemperedDocking
TemperedDocking(TemperedDocking const &rhs)	protocols::docking::TemperedDocking
tempering_	protocols::docking::TemperedDocking	private
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
to_centroid() const	protocols::docking::TemperedDocking
to_centroid_	protocols::docking::TemperedDocking	private
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
use_csts_	protocols::docking::TemperedDocking	private