protocols::pose_selectors::ClusterPoseSelector Class Reference

Cluster poses by some real property as reported by the connected reporter (RMSD, ...) More...

#include <ClusterPoseSelector.hh>

Inheritance diagram for protocols::pose_selectors::ClusterPoseSelector:

Public Member Functions
	ClusterPoseSelector ()
	~ClusterPoseSelector () override=default
std::string	get_name () const override
	Each derived selector must specify its name. More...
rosetta_scripts::PoseSelectorFlags	get_flags () const override
	Report selector flags. More...
void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data) override
	Called by PoseSelectorFactory when constructing new PoseSelectors. Takes care of the specific selector's parsing. More...
utility::vector1< bool >	select_poses (utility::vector1< core::pose::PoseOP > poses) override
	Select poses from provided vector by applying the selection criteria parsed from Tag. More...

Static Public Member Functions
static std::string	name ()
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
Static Public Member Functions inherited from protocols::rosetta_scripts::PoseSelector
static std::string	name ()

Private Attributes
protocols::rosetta_scripts::PosePropertyReporterOP	reporter_
core::Real	radius_
core::Size	structures_per_cluster_
core::Size	max_cluster_size_
core::Size	max_clusters_
core::Size	max_structures_
core::Size	initial_cluster_set_size_
bool	remove_singletons_

Additional Inherited Members
Protected Member Functions inherited from protocols::rosetta_scripts::PoseSelector
	PoseSelector ()
	~PoseSelector () override

Detailed Description

Cluster poses by some real property as reported by the connected reporter (RMSD, ...)

Constructor & Destructor Documentation

protocols::pose_selectors::ClusterPoseSelector::ClusterPoseSelector

(

)

protocols::pose_selectors::ClusterPoseSelector::~ClusterPoseSelector ( )

overridedefault

Member Function Documentation

rosetta_scripts::PoseSelectorFlags protocols::pose_selectors::ClusterPoseSelector::get_flags ( ) const

inlineoverridevirtual

Report selector flags.

Implements protocols::rosetta_scripts::PoseSelector.

References protocols::rosetta_scripts::PSF_NEED_FULL_POSE_SET.

std::string protocols::pose_selectors::ClusterPoseSelector::get_name ( ) const

inlineoverridevirtual

Each derived selector must specify its name.

Implements protocols::rosetta_scripts::PoseSelector.

References name().

Referenced by select_poses().

static std::string protocols::pose_selectors::ClusterPoseSelector::name ( )

inlinestatic

Referenced by get_name(), and provide_xml_schema().

void protocols::pose_selectors::ClusterPoseSelector::parse_my_tag ( utility::tag::TagCOP  tag, basic::datacache::DataMap &  data  )

overridevirtual

Called by PoseSelectorFactory when constructing new PoseSelectors. Takes care of the specific selector's parsing.

Reimplemented from protocols::rosetta_scripts::PoseSelector.

References initial_cluster_set_size_, max_cluster_size_, max_clusters_, max_structures_, radius_, remove_singletons_, reporter_, structures_per_cluster_, and protocols::TR().

void protocols::pose_selectors::ClusterPoseSelector::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd )

static

References protocols::rosetta_scripts::PoseSelectorFactory::complex_type_name_for_pose_selector(), name(), and protocols::rosetta_scripts::PosePropertyReporterFactory::pose_reporter_group_name().

Referenced by protocols::pose_selectors::ClusterPoseSelectorCreator::provide_xml_schema().

utility::vector1< bool > protocols::pose_selectors::ClusterPoseSelector::select_poses ( utility::vector1< core::pose::PoseOP >  poses )

overridevirtual

Select poses from provided vector by applying the selection criteria parsed from Tag.

Implements protocols::rosetta_scripts::PoseSelector.

References protocols::cluster::AssignToClustersMover::apply(), get_name(), initial_cluster_set_size_, max_cluster_size_, max_clusters_, max_structures_, radius_, remove_singletons_, reporter_, structures_per_cluster_, and protocols::TR().

Member Data Documentation

core::Size protocols::pose_selectors::ClusterPoseSelector::initial_cluster_set_size_

private

Referenced by parse_my_tag(), and select_poses().

core::Size protocols::pose_selectors::ClusterPoseSelector::max_cluster_size_

private

Referenced by parse_my_tag(), and select_poses().

core::Size protocols::pose_selectors::ClusterPoseSelector::max_clusters_

private

Referenced by parse_my_tag(), and select_poses().

core::Size protocols::pose_selectors::ClusterPoseSelector::max_structures_

private

Referenced by parse_my_tag(), and select_poses().

core::Real protocols::pose_selectors::ClusterPoseSelector::radius_

private

Referenced by parse_my_tag(), and select_poses().

bool protocols::pose_selectors::ClusterPoseSelector::remove_singletons_

private

Referenced by parse_my_tag(), and select_poses().

protocols::rosetta_scripts::PosePropertyReporterOP protocols::pose_selectors::ClusterPoseSelector::reporter_

private

Referenced by parse_my_tag(), and select_poses().

core::Size protocols::pose_selectors::ClusterPoseSelector::structures_per_cluster_

private

Referenced by parse_my_tag(), and select_poses().

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The documentation for this class was generated from the following files:

• src/protocols/pose_selectors/ClusterPoseSelector.hh
• src/protocols/pose_selectors/ClusterPoseSelector.cc