ThermalMinimizer.cc File Reference

#include <protocols/recces/scratch/ThermalMinimizer.hh>
#include <protocols/recces/scratch/ThermalMinimizerCreator.hh>
#include <core/pose/Pose.hh>
#include <basic/Tracer.hh>
#include <utility/tag/Tag.hh>
#include <core/types.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/VariantType.hh>
#include <core/io/silent/BinarySilentStruct.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/rms_util.hh>
#include <core/kinematics/MoveMap.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/database/open.hh>
#include <protocols/viewer/viewers.hh>
#include <core/pose/full_model_info/FullModelInfo.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <core/pose/util.hh>
#include <core/init/init.hh>
#include <core/import_pose/import_pose.hh>
#include <core/import_pose/pose_stream/PoseInputStream.hh>
#include <core/import_pose/pose_stream/PoseInputStream.fwd.hh>
#include <core/import_pose/pose_stream/PDBPoseInputStream.hh>
#include <core/import_pose/pose_stream/SilentFilePoseInputStream.hh>
#include <utility/vector1.hh>
#include <ObjexxFCL/string.functions.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/modeler/align/util.hh>
#include <core/io/rna/RNA_DataReader.hh>
#include <core/id/TorsionID.hh>
#include <core/pose/PDBInfo.hh>
#include <protocols/recces/sampler/rna/MC_RNA_Suite.hh>
#include <protocols/recces/sampler/rna/MC_RNA_MultiSuite.hh>
#include <protocols/moves/SimulatedTempering.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/recces/sampler/rna/MC_RNA_KIC_Sampler.hh>
#include <protocols/stepwise/sampler/rna/RNA_KIC_Sampler.hh>
#include <protocols/recces/util.hh>
#include <protocols/recces/scratch/thermal_sampler.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/chemical.OptionKeys.gen.hh>
#include <basic/options/keys/full_model.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/rna.OptionKeys.gen.hh>
#include <basic/options/keys/stepwise.OptionKeys.gen.hh>
#include <basic/options/keys/recces.OptionKeys.gen.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::recces
	protocols::recces::scratch

Functions
static basic::Tracer	TR ("protocols.recces.scratch.ThermalMinimizer")
void	protocols::recces::scratch::set_gaussian_stdevs (utility::vector1< MC_RNA_KIC_SamplerOP > &internal_bb_sampler, utility::vector1< MC_OneTorsionOP > &chi_sampler, Real const temp, core::Size const )
void	protocols::recces::scratch::set_gaussian_stdevs (utility::vector1< MC_RNA_KIC_SamplerOP > &internal_bb_sampler, utility::vector1< MC_OneTorsionOP > &chi_sampler, MC_RNA_MultiSuite &standard_bb_sampler, Real const temp, core::Size const total_sampled)
bool	protocols::recces::scratch::mm_compatible_with_kic (core::kinematics::MoveMapOP mm, core::Size const ii)
std::ostream &	protocols::recces::scratch::operator<< (std::ostream &os, ThermalMinimizer const &mover)

Function Documentation

static basic::Tracer TR ( "protocols.recces.scratch.ThermalMinimizer"  )

static