| apply(core::pose::Pose &pose) override | protocols::ligand_docking::HighResDocker | virtual |
| apply(utility::vector1< core::pose::Pose > &poses, utility::vector1< core::Real > ¤t_scores, utility::vector1< char > qsar_chars, core::Size cycle) | protocols::ligand_docking::HighResDocker | |
| apply(core::pose::Pose &pose, core::Real ¤t_score, char qsar_char, core::Size cycle) | protocols::ligand_docking::HighResDocker | |
| apply_rigid_body_moves(core::pose::Pose &pose, utility::vector1< protocols::moves::MoverOP > &rigid_body_movers) | protocols::ligand_docking::HighResDocker | protected |
| chains_ | protocols::ligand_docking::HighResDocker | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const override | protocols::ligand_docking::HighResDocker | virtual |
| create() | protocols::moves::Mover | virtual |
| create_rigid_body_movers(core::pose::Pose const &pose) const | protocols::ligand_docking::HighResDocker | protected |
| enable_ligand_rotamer_packing(core::pose::Pose const &pose, core::Size const ligand_residue_id, core::pack::task::PackerTaskOP &pack_task) const | protocols::ligand_docking::HighResDocker | protected |
| fresh_instance() const override | protocols::ligand_docking::HighResDocker | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const override | protocols::ligand_docking::HighResDocker | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_self_ptr() const | protocols::moves::Mover | inline |
| get_self_ptr() | protocols::moves::Mover | inline |
| get_self_weak_ptr() const | protocols::moves::Mover | inline |
| get_self_weak_ptr() | protocols::moves::Mover | inline |
| get_type() const | protocols::moves::Mover | inline |
| HighResDocker() | protocols::ligand_docking::HighResDocker | |
| HighResDocker(HighResDocker const &that) | protocols::ligand_docking::HighResDocker | |
| HighResDocker(core::Size num_cycles, core::Size repack_every_Nth, core::scoring::ScoreFunctionOP score_fxn, MoveMapBuilderOP movemap_builder, std::string const &resfile="") | protocols::ligand_docking::HighResDocker | |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| make_packer_task(core::pose::Pose const &pose, bool all_residues=false) const | protocols::ligand_docking::HighResDocker | protected |
| make_packer_task_from_vector(core::pose::Pose const &pose, ligand_options::Interface const &allow_repack) const | protocols::ligand_docking::HighResDocker | protected |
| movemap_builder_ | protocols::ligand_docking::HighResDocker | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| mover_name() | protocols::ligand_docking::HighResDocker | static |
| name() | protocols::moves::Mover | inlinestatic |
| num_cycles_ | protocols::ligand_docking::HighResDocker | private |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &) override | protocols::ligand_docking::HighResDocker | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| provide_citation_info(basic::citation_manager::CitationCollectionList &) const override | protocols::ligand_docking::HighResDocker | virtual |
| provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | protocols::ligand_docking::HighResDocker | static |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| remove_ligand_dihedral_restraints(core::pose::Pose &pose, MinimizeLigandOPs &minimized_ligands) const | protocols::ligand_docking::HighResDocker | protected |
| remove_ligand_tethers(core::pose::Pose pose, TetherLigandOPs ligand_tethers) | protocols::ligand_docking::HighResDocker | protected |
| repack_every_Nth_ | protocols::ligand_docking::HighResDocker | private |
| reset_status() | protocols::moves::Mover | |
| resfile_ | protocols::ligand_docking::HighResDocker | private |
| score_fxn_ | protocols::ligand_docking::HighResDocker | private |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| setup_ligands_to_minimize(core::pose::Pose &pose, char chain=0) | protocols::ligand_docking::HighResDocker | protected |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| tether_ligands(core::pose::Pose &pose, char chain=0) | protocols::ligand_docking::HighResDocker | protected |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| type() const | protocols::moves::Mover | inline |
| ~HighResDocker() override | protocols::ligand_docking::HighResDocker | |
1.8.7