protocols::docking::DockingPrepackProtocol Member List

This is the complete list of members for protocols::docking::DockingPrepackProtocol, including all inherited members.

add_additional_task_operaration(core::pack::task::operation::TaskOperationOP task_operation)	protocols::docking::DockingHighRes
apply(core::pose::Pose &) override	protocols::docking::DockingPrepackProtocol	virtual
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
create()	protocols::moves::Mover	virtual
dock_ppk_	protocols::docking::DockingPrepackProtocol	private
DockingHighRes()	protocols::docking::DockingHighRes
DockingHighRes(core::Size const rb_jump)	protocols::docking::DockingHighRes
DockingHighRes(core::Size const rb_jump, core::scoring::ScoreFunctionOP scorefxn)	protocols::docking::DockingHighRes
DockingHighRes(core::Size const rb_jump, core::scoring::ScoreFunctionOP scorefxn, core::scoring::ScoreFunctionOP scorefxn_pack)	protocols::docking::DockingHighRes
DockingHighRes(DockJumps const movable_jumps, core::scoring::ScoreFunctionOP scorefxn, core::scoring::ScoreFunctionOP scorefxn_pack)	protocols::docking::DockingHighRes
DockingHighRes(DockingHighRes const &old_instance)	protocols::docking::DockingHighRes
DockingPrepackProtocol()	protocols::docking::DockingPrepackProtocol
fa_dock_slide_into_contact_	protocols::docking::DockingPrepackProtocol	private
finalize_setup(core::pose::Pose &)	protocols::docking::DockingPrepackProtocol	private
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_additional_task_operarations()	protocols::docking::DockingHighRes
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::docking::DockingPrepackProtocol	virtual
get_native_pose() const	protocols::moves::Mover
get_partners() const	protocols::docking::DockingHighRes	inline
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
ignore_default_task()	protocols::docking::DockingHighRes
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
init_from_options()	protocols::docking::DockingPrepackProtocol	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
membrane_	protocols::docking::DockingPrepackProtocol	private
movable_jumps()	protocols::docking::DockingHighRes	inline
movable_jumps() const	protocols::docking::DockingHighRes	inline
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
mover_name()	protocols::docking::DockingPrepackProtocol	static
movers_setup_	protocols::docking::DockingPrepackProtocol	private
name()	protocols::moves::Mover	inlinestatic
pack_operations_	protocols::docking::DockingPrepackProtocol	private
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
partners()	protocols::docking::DockingHighRes	inline
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
prepack_full_repack_	protocols::docking::DockingPrepackProtocol	private
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::docking::DockingPrepackProtocol	static
register_options()	protocols::docking::DockingPrepackProtocol	private
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
rt_min()	protocols::docking::DockingHighRes	inline
rtmin_mover_	protocols::docking::DockingPrepackProtocol	private
sc_min()	protocols::docking::DockingHighRes	inline
scmin_mover_	protocols::docking::DockingPrepackProtocol	private
score_and_output(std::string filename, core::pose::Pose &)	protocols::docking::DockingPrepackProtocol
scorefxn() const	protocols::docking::DockingHighRes
scorefxn_pack() const	protocols::docking::DockingHighRes
set_additional_task_operarations(utility::vector1< core::pack::task::operation::TaskOperationOP > additional_task_operations)	protocols::docking::DockingHighRes
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_dock_ppk(bool dock_ppk)	protocols::docking::DockingPrepackProtocol
set_ignore_default_task(bool ignore_default_task)	protocols::docking::DockingHighRes
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_interface_definition_task_operation(protocols::simple_task_operations::InterfaceTaskOperationOP interface_definition)	protocols::docking::DockingHighRes
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_movable_jumps(DockJumps movable_jumps)	protocols::docking::DockingHighRes	inline
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_partners(std::string partners)	protocols::docking::DockingHighRes	inline
set_rt_min(bool rt_min)	protocols::docking::DockingHighRes	inline
set_sc_min(bool sc_min)	protocols::docking::DockingHighRes	inline
set_scorefxn(core::scoring::ScoreFunctionOP scorefxn)	protocols::docking::DockingHighRes
set_scorefxn_pack(core::scoring::ScoreFunctionOP scorefxn_pack)	protocols::docking::DockingHighRes
set_task_factory(core::pack::task::TaskFactoryCOP tf)	protocols::docking::DockingHighRes
set_type(std::string const &setting)	protocols::moves::Mover	inline
setup_defaults()	protocols::docking::DockingPrepackProtocol
setup_pack_operation_movers()	protocols::docking::DockingPrepackProtocol
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
task_factory()	protocols::docking::DockingHighRes
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
tf2()	protocols::docking::DockingHighRes	protected
trans_away_vec_	protocols::docking::DockingPrepackProtocol	private
trans_back_vec_	protocols::docking::DockingPrepackProtocol	private
trans_magnitude_	protocols::docking::DockingPrepackProtocol	private
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
~DockingHighRes() override	protocols::docking::DockingHighRes
~DockingPrepackProtocol() override	protocols::docking::DockingPrepackProtocol