| append_two_body_energy_computations_to_work_vector(core::pose::Pose const &pose, core::scoring::ScoreFunction const &scfxn, utility::graph::GraphCOP packer_neighbor_graph, interaction_graph::PrecomputedPairEnergiesInteractionGraphOP pig, utility::vector1< basic::thread_manager::RosettaThreadFunction > &work_vector, basic::thread_manager::RosettaThreadAssignmentInfo const &thread_assignment_info) const override | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | virtual |
| begin() override | core::pack::rotamer_set::RotamerSets | inlinevirtual |
| build_rotamers(pose::Pose const &pose, scoring::ScoreFunction const &scfxn, utility::graph::GraphCOP packer_neighbor_graph) | core::pack::rotamer_set::RotamerSets | |
| compute_energies(pose::Pose const &pose, scoring::ScoreFunction const &scfxn, utility::graph::GraphCOP packer_neighbor_graph, interaction_graph::InteractionGraphBaseOP ig, core::Size const threads_to_request) override | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | virtual |
| compute_proline_correction_energies_for_otf_graph(pose::Pose const &pose, conformation::symmetry::SymmetryInfoCOP symm_info, scoring::ScoreFunction const &scfxn, utility::graph::GraphCOP packer_neighbor_graph, interaction_graph::SymmOnTheFlyInteractionGraphOP otfig) | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | private |
| construct_one_body_energy_work_vector(core::pose::Pose const &pose, core::scoring::ScoreFunction const &scfxn, utility::graph::GraphCOP packer_neighbor_graph, interaction_graph::InteractionGraphBaseOP ig, basic::thread_manager::RosettaThreadAssignmentInfo const &thread_assignment_info) const | core::pack::rotamer_set::RotamerSets | virtual |
| drop_rotamers(utility::vector1< bool > const &rotamers_to_delete) | core::pack::rotamer_set::RotamerSets | |
| dump_pdb(pose::Pose const &pose, std::string const &filename) const | core::pack::rotamer_set::RotamerSets | |
| end() override | core::pack::rotamer_set::RotamerSets | inlinevirtual |
| final_visit_to_edge(pose::Pose const &pose, utility::graph::GraphCOP packer_neighbor_graph, uint ii_resid, uint jj_resid) | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | private |
| FixbbRotamerSets() | core::pack::rotamer_set::FixbbRotamerSets | |
| get_bb_bbE(pose::Pose const &pose, scoring::ScoreFunction const &scfxn, conformation::Residue const &res1, conformation::Residue const &res2) | core::pack::rotamer_set::RotamerSets | static |
| get_sc_bbE(pose::Pose const &pose, scoring::ScoreFunction const &scfxn, conformation::Residue const &res1, conformation::Residue const &res2) | core::pack::rotamer_set::RotamerSets | static |
| has_rotamer_set_for_residue(uint const resid) const | core::pack::rotamer_set::RotamerSets | |
| initialize_pose_for_rotsets_creation(pose::Pose &pose) const override | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | virtual |
| moltenres_2_resid(uint) const override | core::pack::rotamer_set::RotamerSets | virtual |
| moltenres_2_resid_vector() const override | core::pack::rotamer_set::RotamerSets | inlinevirtual |
| moltenres_for_rotamer(uint) const override | core::pack::rotamer_set::RotamerSets | virtual |
| moltenres_rotid_2_rotid(uint moltenres, uint moltenresrotid) const override | core::pack::rotamer_set::RotamerSets | virtual |
| nmoltenres() const override | core::pack::rotamer_set::RotamerSets | virtual |
| nrotamer_offset_for_moltenres(uint) const override | core::pack::rotamer_set::RotamerSets | virtual |
| nrotamers() const override | core::pack::rotamer_set::RotamerSets | virtual |
| nrotamers_for_moltenres(uint) const override | core::pack::rotamer_set::RotamerSets | virtual |
| offset_data_up_to_date() | core::pack::rotamer_set::RotamerSets | |
| orient_rotamer_set_to_symmetric_partner(pose::Pose const &pose, RotamerSetCOP rotset_for_seqpos, uint const &symmpos, bool const set_up_mirror_types_if_has_mirror_symmetry=false) | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | static |
| PackerTaskCOP typedef | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | |
| parent typedef | core::pack::rotamer_set::FixbbRotamerSets | |
| prepare_sets_for_packing(pose::Pose const &pose, scoring::ScoreFunction const &) | core::pack::rotamer_set::RotamerSets | |
| prepare_symm_otf_interaction_graph(pose::Pose const &pose, scoring::ScoreFunction const &scfxn, utility::graph::GraphCOP packer_neighbor_graph, interaction_graph::SymmOnTheFlyInteractionGraphOP ig) | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | private |
| res_for_rotamer(uint) const override | core::pack::rotamer_set::RotamerSets | virtual |
| resid_2_moltenres(uint) const override | core::pack::rotamer_set::RotamerSets | virtual |
| resid_2_moltenres_vector() const override | core::pack::rotamer_set::RotamerSets | inlinevirtual |
| rotamer(uint) const override | core::pack::rotamer_set::RotamerSets | virtual |
| rotamer_for_moltenres(uint moltenres_id, uint rotamerid) const override | core::pack::rotamer_set::RotamerSets | virtual |
| rotamer_set_for_moltenresidue(uint moltenresid) const override | core::pack::rotamer_set::RotamerSets | virtual |
| rotamer_set_for_moltenresidue(uint moltenresid) override | core::pack::rotamer_set::RotamerSets | virtual |
| rotamer_set_for_residue(uint resid) const override | core::pack::rotamer_set::RotamerSets | virtual |
| rotamer_set_for_residue(uint resid) override | core::pack::rotamer_set::RotamerSets | virtual |
| RotamerSets() | core::pack::rotamer_set::RotamerSets | |
| RotamerSetsBase() | core::pack_basic::RotamerSetsBase | |
| RotamerSetVector typedef | core::pack::rotamer_set::FixbbRotamerSets | |
| rotid_on_moltenresidue(uint rotid) const override | core::pack::rotamer_set::RotamerSets | virtual |
| set_explicit_rotamers(core::Size moltenresid, RotamerSetOP rotamers) | core::pack::rotamer_set::RotamerSets | |
| set_task(task::PackerTaskCOP task) | core::pack::rotamer_set::RotamerSets | |
| show(std::ostream &out) const override | core::pack::rotamer_set::RotamerSets | virtual |
| SymmetricConformation typedef | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | |
| SymmetricRotamerSets() | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | |
| SymmetryInfoCOP typedef | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | |
| task() const | core::pack::rotamer_set::RotamerSets | |
| total_residue() const override | core::pack::rotamer_set::RotamerSets | virtual |
| update_offset_data() | core::pack::rotamer_set::RotamerSets | |
| ~FixbbRotamerSets() override | core::pack::rotamer_set::FixbbRotamerSets | |
| ~RotamerSets() override | core::pack::rotamer_set::RotamerSets | |
| ~RotamerSetsBase() override | core::pack_basic::RotamerSetsBase | |
| ~SymmetricRotamerSets() override | core::pack::rotamer_set::symmetry::SymmetricRotamerSets | |