FragmentJumpCM.cc File Reference

#include <protocols/abinitio/abscript/FragmentJumpCM.hh>
#include <core/environment/DofPassport.hh>
#include <core/environment/LocalPosition.hh>
#include <protocols/environment/claims/JumpClaim.hh>
#include <protocols/environment/claims/TorsionClaim.hh>
#include <protocols/abinitio/abscript/JumpSampleData.hh>
#include <protocols/abinitio/abscript/FragmentJumpCMCreator.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <basic/datacache/WriteableCacheableMap.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/fragment/FragSet.hh>
#include <core/fragment/SecondaryStructure.hh>
#include <core/fragment/OrderedFragSet.hh>
#include <core/fragment/FrameList.hh>
#include <core/fragment/Frame.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/select/residue_selector/util.hh>
#include <core/pose/Pose.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <protocols/simple_moves/FragmentMover.hh>
#include <protocols/abinitio/PairingStatistics.hh>
#include <protocols/abinitio/TemplateJumpSetup.hh>
#include <protocols/abinitio/Templates.hh>
#include <protocols/jumping/JumpSetup.hh>
#include <protocols/jumping/JumpSample.hh>
#include <protocols/jumping/RandomSheetBuilder.hh>
#include <core/scoring/dssp/PairingsList.hh>
#include <utility>
#include <utility/io/izstream.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/string_util.hh>
#include <utility/tag/Tag.hh>
#include <basic/datacache/DataMap.hh>
#include <basic/Tracer.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::abinitio
	protocols::abinitio::abscript

Functions
static basic::Tracer	tr ("protocols.abinitio.abscript.FragmentJumpCM", basic::t_info)

Detailed Description

Author

Justin Porter

Function Documentation

static basic::Tracer tr ( "protocols.abinitio.abscript.FragmentJumpCM"  , basic::t_info    )

static

Referenced by protocols::abinitio::abscript::FragmentJumpCM::build_claims(), protocols::abinitio::abscript::FragmentJumpCM::calculate_jump_sample(), protocols::abinitio::abscript::FragmentJumpCM::parse_my_tag(), protocols::abinitio::abscript::FragmentJumpCM::set_topology(), and protocols::abinitio::abscript::FragmentJumpCM::yield_claims().