protocols::legacy_sewing::LegacyRepeatAssemblyMover Member List

This is the complete list of members for protocols::legacy_sewing::LegacyRepeatAssemblyMover, including all inherited members.

add_repeats(AssemblyOP assembly) const	protocols::legacy_sewing::LegacyRepeatAssemblyMover
add_starting_model(AssemblyOP assembly) const	protocols::legacy_sewing::LegacyAssemblyMover	virtual
append_movie_frame(AssemblyOP assembly, core::Size cycle) const	protocols::legacy_sewing::LegacyAssemblyMover
apply(core::pose::Pose &pose) override	protocols::legacy_sewing::LegacyAssemblyMover	virtual
assembly_scorefxn_	protocols::legacy_sewing::LegacyAssemblyMover	protected
base_native_bonus_	protocols::legacy_sewing::LegacyAssemblyMover	protected
cen_scorefxn_	protocols::legacy_sewing::LegacyAssemblyMover	protected
clash_scorefxn_	protocols::legacy_sewing::LegacyRepeatAssemblyMover	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::legacy_sewing::LegacyRepeatAssemblyMover	virtual
create()	protocols::moves::Mover	virtual
define_assembly_mover_ct_gen(utility::tag::XMLSchemaDefinition &xsd)	protocols::legacy_sewing::LegacyAssemblyMover	static
dfs_cycle_finder(ModelNode const *reference_node, utility::vector1< ModelNode const * > visited_nodes, AssemblyOP assembly) const	protocols::legacy_sewing::LegacyRepeatAssemblyMover
edge_file_	protocols::legacy_sewing::LegacyAssemblyMover	protected
fa_scorefxn_	protocols::legacy_sewing::LegacyAssemblyMover	protected
follow_random_edge_from_node(AssemblyOP assembly, ModelNode const *reference_node) const	protocols::legacy_sewing::LegacyAssemblyMover
fresh_instance() const override	protocols::legacy_sewing::LegacyRepeatAssemblyMover	virtual
generate_assembly() override	protocols::legacy_sewing::LegacyRepeatAssemblyMover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_centroid_pose(AssemblyOP assembly) const	protocols::legacy_sewing::LegacyAssemblyMover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_fullatom_pose(AssemblyOP assembly) const	protocols::legacy_sewing::LegacyAssemblyMover	virtual
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::legacy_sewing::LegacyRepeatAssemblyMover	virtual
get_native_pose() const	protocols::moves::Mover
get_segment_coords(SewSegment const &segment) const	protocols::legacy_sewing::LegacyRepeatAssemblyMover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
graph_	protocols::legacy_sewing::LegacyAssemblyMover	protected
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
legacy_assembly_mover_ct_namer(std::string const &)	protocols::legacy_sewing::LegacyAssemblyMover	static
LegacyAssemblyMover()	protocols::legacy_sewing::LegacyAssemblyMover
LegacyRepeatAssemblyMover()	protocols::legacy_sewing::LegacyRepeatAssemblyMover
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
mover_name()	protocols::legacy_sewing::LegacyRepeatAssemblyMover	static
name()	protocols::moves::Mover	inlinestatic
neighbor_cutoff_	protocols::legacy_sewing::LegacyAssemblyMover	protected
num_repeating_segments_	protocols::legacy_sewing::LegacyRepeatAssemblyMover	private
num_repeats_	protocols::legacy_sewing::LegacyRepeatAssemblyMover	private
num_trials_	protocols::legacy_sewing::LegacyRepeatAssemblyMover	private
output_base_stats(AssemblyOP const &assembly)	protocols::legacy_sewing::LegacyRepeatAssemblyMover
output_stats(AssemblyOP const &assembly, core::pose::Pose &pose, std::string indicator_whether_from_LegacyMonteCarloAssemblyMover_or_LegacyExhaustiveAssemblyMover)	protocols::legacy_sewing::LegacyAssemblyMover	virtual
parent typedef	protocols::legacy_sewing::LegacyRepeatAssemblyMover
parse_global_requirements(TagCOP tag, basic::datacache::DataMap &data)	protocols::legacy_sewing::LegacyAssemblyMover	virtual
parse_intra_segment_requirements(TagCOP tag, basic::datacache::DataMap &data)	protocols::legacy_sewing::LegacyAssemblyMover	virtual
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data) override	protocols::legacy_sewing::LegacyRepeatAssemblyMover	virtual
parse_requirements(TagCOP tag, basic::datacache::DataMap &data)	protocols::legacy_sewing::LegacyAssemblyMover	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::legacy_sewing::LegacyRepeatAssemblyMover	static
refine_assembly(AssemblyOP &assembly) override	protocols::legacy_sewing::LegacyRepeatAssemblyMover	virtual
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const override	protocols::legacy_sewing::LegacyAssemblyMover	virtual
requirement_factory_	protocols::legacy_sewing::LegacyAssemblyMover	protected
requirement_set_	protocols::legacy_sewing::LegacyAssemblyMover	protected
reset_status()	protocols::moves::Mover
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
threshold_score_of_complete_cycle_	protocols::legacy_sewing::LegacyRepeatAssemblyMover	private
transform_segment_coords(SewSegment &segment, numeric::xyzTransform< core::Real > transformer, numeric::xyzVector< float > com, core::Size n_transformations) const	protocols::legacy_sewing::LegacyRepeatAssemblyMover
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline