core::import_pose::libraries::RNA_LibraryManager Class Reference

Holds all libraries relevant to FARFAR as CONST copies: More...

#include <RNA_LibraryManager.hh>

Inheritance diagram for core::import_pose::libraries::RNA_LibraryManager:

Public Member Functions
core::fragment::rna::RNA_Fragments const &	rna_fragment_library (std::string const &tag)
RNA_JumpLibrary const &	rna_jump_library (std::string const &tag)
RNA_JumpLibraryCOP const &	rna_jump_library_cop (std::string const &tag)
RNA_JumpLibraryCOP const &	rna_jump_library_cop ()
BasePairStepLibrary const &	canonical_base_pair_step_library ()
BasePairStepLibrary const &	general_base_pair_step_library ()

Private Member Functions
	RNA_LibraryManager ()
	private constructor More...

Private Attributes
std::map< std::string, core::fragment::rna::RNA_FragmentsCOP >	rna_fragment_libraries_
std::map< std::string, RNA_JumpLibraryCOP >	rna_jump_libraries_
BasePairStepLibraryCOP	canonical_base_pair_step_library_
BasePairStepLibraryCOP	general_base_pair_step_library_

Friends
class	utility::SingletonBase< RNA_LibraryManager >

Detailed Description

Holds all libraries relevant to FARFAR as CONST copies:

JumpLibrary FullAtomRNA_Fragments BasePairStepLibrary, ...

However, those const libraries include some mutable data to allow for efficient, lazy loading – need to put mutexes around those functions that update those data.

Constructor & Destructor Documentation

core::import_pose::libraries::RNA_LibraryManager::RNA_LibraryManager ( )

inlineprivate

private constructor

Member Function Documentation

BasePairStepLibrary const & core::import_pose::libraries::RNA_LibraryManager::canonical_base_pair_step_library

(

)

BasePairStepLibrary const & core::import_pose::libraries::RNA_LibraryManager::general_base_pair_step_library

(

)

RNA_Fragments const & core::import_pose::libraries::RNA_LibraryManager::rna_fragment_library

(

std::string const &

tag

)

RNA_JumpLibrary const & core::import_pose::libraries::RNA_LibraryManager::rna_jump_library

(

std::string const &

tag

)

RNA_JumpLibraryCOP const & core::import_pose::libraries::RNA_LibraryManager::rna_jump_library_cop

(

std::string const &

tag

)

RNA_JumpLibraryCOP const & core::import_pose::libraries::RNA_LibraryManager::rna_jump_library_cop

(

)

References core::import_pose::options::RNA_FragmentMonteCarloOptions::initialize_from_options(), and core::import_pose::options::RNA_FragmentMonteCarloOptions::jump_library_file().

Friends And Related Function Documentation

friend class utility::SingletonBase< RNA_LibraryManager >

friend

Member Data Documentation

BasePairStepLibraryCOP core::import_pose::libraries::RNA_LibraryManager::canonical_base_pair_step_library_

private

BasePairStepLibraryCOP core::import_pose::libraries::RNA_LibraryManager::general_base_pair_step_library_

private

std::map< std::string, core::fragment::rna::RNA_FragmentsCOP > core::import_pose::libraries::RNA_LibraryManager::rna_fragment_libraries_

private

std::map< std::string, RNA_JumpLibraryCOP > core::import_pose::libraries::RNA_LibraryManager::rna_jump_libraries_

private

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The documentation for this class was generated from the following files:

• src/core/import_pose/libraries/RNA_LibraryManager.hh
• src/core/import_pose/libraries/RNA_LibraryManager.cc