| avoid_negative_zero(core::Real const value, core::Real const threshold) | protocols::peptide_deriver::PeptideDeriverOutputter | |
| begin_receptor_partner_pair(char const receptor_chain_letter, char const partner_chain_letter, core::Real const, std::string const &) override | protocols::peptide_deriver::PeptideDeriverPoseOutputter | virtual |
| begin_structure(core::pose::Pose const &, std::string const &) override | protocols::peptide_deriver::PeptideDeriverPoseOutputter | inlinevirtual |
| chain_pair_pose_prepared(core::pose::Pose const &pose) override | protocols::peptide_deriver::PeptideDeriverPoseOutputter | virtual |
| clone() const | protocols::peptide_deriver::PeptideDeriverPoseOutputter | |
| current_chain_pair_pose_ | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| current_partner_chain_letter_ | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| current_peptide_length_ | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| current_receptor_chain_letter_ | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| end_receptor_partner_pair() override | protocols::peptide_deriver::PeptideDeriverPoseOutputter | inlinevirtual |
| end_structure() override | protocols::peptide_deriver::PeptideDeriverPoseOutputter | inlinevirtual |
| is_chain_pair_new_ | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| is_dump_best_peptide_pose_ | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| is_dump_cyclic_poses_ | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| is_dump_prepared_pose_ | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| output_pose(core::pose::Pose &pose, std::string const &pose_name) | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| peptide_entry(PeptideDeriverEntryType entry_type, core::Real const total_isc, DerivedPeptideEntryCOP entry) override | protocols::peptide_deriver::PeptideDeriverPoseOutputter | virtual |
| peptide_length(core::Size const pep_length) override | protocols::peptide_deriver::PeptideDeriverPoseOutputter | virtual |
| PeptideDeriverOutputter() | protocols::peptide_deriver::PeptideDeriverOutputter | |
| PeptideDeriverPoseOutputter(bool const is_dump_best_peptide_pose, bool const is_dump_prepared_pose, bool const is_dump_cyclic_poses, core::scoring::ScoreFunctionCOP scorefxn) | protocols::peptide_deriver::PeptideDeriverPoseOutputter | |
| PeptideDeriverPoseOutputter(PeptideDeriverPoseOutputter const &src) | protocols::peptide_deriver::PeptideDeriverPoseOutputter | |
| scorefxn_ | protocols::peptide_deriver::PeptideDeriverPoseOutputter | private |
| ~PeptideDeriverOutputter() | protocols::peptide_deriver::PeptideDeriverOutputter | virtual |
| ~PeptideDeriverPoseOutputter() override | protocols::peptide_deriver::PeptideDeriverPoseOutputter | |