| compute_metrics() const | core::scoring::motif::MotifHits | |
| dump_motifs_pdb(std::ostream &out, int &count, Size &atomno, numeric::Xforms const &xforms=XsI) const | core::scoring::motif::MotifHits | |
| dump_motifs_pdb(std::string const &fname, Size &atomno, numeric::Xforms const &xforms=XsI) const | core::scoring::motif::MotifHits | |
| dump_motifs_pdb(std::string const &fname, core::pose::Pose const &pose, Size &atomno, numeric::Xforms const &xforms=XsI) const | core::scoring::motif::MotifHits | |
| dump_motifs_pdb(std::ostream &out, int &count, numeric::Xforms const &xforms=XsI) const | core::scoring::motif::MotifHits | inline |
| dump_motifs_pdb(std::string const &fname, numeric::Xforms const &xforms=XsI) const | core::scoring::motif::MotifHits | inline |
| dump_motifs_pdb(std::string const &fname, core::pose::Pose const &pose, numeric::Xforms const &xforms=XsI) const | core::scoring::motif::MotifHits | inline |
| dump_motifs_pdb(std::ostream &out, numeric::Xforms const &xforms=XsI) const | core::scoring::motif::MotifHits | inline |
| dump_resfile(std::string fn) const | core::scoring::motif::MotifHits | |
| filter_redundant() | core::scoring::motif::MotifHits | |
| get_resfile(bool restrict=false) const | core::scoring::motif::MotifHits | |
| get_resfile(bool restrict, std::set< core::Size > &resi_in_resfile) const | core::scoring::motif::MotifHits | |
| hits1(Size ir) const | core::scoring::motif::MotifHits | |
| hits2(Size ir) const | core::scoring::motif::MotifHits | |
| num_hits(Size ir) const | core::scoring::motif::MotifHits | |
| num_hits1(Size ir) const | core::scoring::motif::MotifHits | |
| num_hits2(Size ir) const | core::scoring::motif::MotifHits | |
| operator<<(std::ostream &out, MotifHits const &h) | core::scoring::motif::MotifHits | friend |
| paircover | core::scoring::motif::MotifHits | mutable |
| push_back(MotifHit const &h) | core::scoring::motif::MotifHits | |
| push_back_raw(MotifHit const &h) | core::scoring::motif::MotifHits | |
| rescover | core::scoring::motif::MotifHits | mutable |
| ResMap typedef | core::scoring::motif::MotifHits | |
| resmap1_ | core::scoring::motif::MotifHits | |
| resmap2_ | core::scoring::motif::MotifHits | |
| sort_by_rms_and_energy() | core::scoring::motif::MotifHits | |
| stat_motifs(MotifHitStats &stat) const | core::scoring::motif::MotifHits | |
| total_score | core::scoring::motif::MotifHits | mutable |