| bForceSingleSheet_ | protocols::jumping::SheetBuilder | private |
| builder_loop(core::scoring::dssp::PairingsList &jump_pairings) const | protocols::jumping::SheetBuilder | private |
| check_next_pairing(ObjexxFCL::FArray3D_int &, core::Size, core::Size) const | protocols::jumping::SheetBuilder | private |
| check_pairing_intersect(ObjexxFCL::FArray1A_int, ObjexxFCL::FArray1A_int) const | protocols::jumping::SheetBuilder | private |
| check_sheet_pairings(ObjexxFCL::FArray2A_int pairing_list, const int last_pairing, const bool force_single_sheet) const | protocols::jumping::SheetBuilder | private |
| check_two_pairings(ObjexxFCL::FArray1A_int pairing1, ObjexxFCL::FArray1A_int pairing2, int &common_strands) const | protocols::jumping::SheetBuilder | private |
| choose_next_pairing(ObjexxFCL::FArray3D_int &, core::Size, core::Size) const | protocols::jumping::SheetBuilder | private |
| clean_jumps(JumpSample const &js) const override | protocols::jumping::SheetBuilder | inlinevirtual |
| create_jump_sample() const override | protocols::jumping::SheetBuilder | virtual |
| create_new_random_topol() const | protocols::jumping::SheetBuilder | inlineprotectedvirtual |
| generate_jump_frags(JumpSample const &, core::kinematics::MoveMap const &mm) const | protocols::jumping::BaseJumpSetup | virtual |
| pairings_ | protocols::jumping::SheetBuilder | private |
| same_strand_ | protocols::jumping::SheetBuilder | private |
| secondary_structure_ | protocols::jumping::SheetBuilder | private |
| sheet_sizes_ | protocols::jumping::SheetBuilder | mutableprivate |
| SheetBuilder(core::fragment::SecondaryStructureOP, core::scoring::dssp::PairingsList const &, SheetTopology const &) | protocols::jumping::SheetBuilder | |
| SheetBuilder(SheetBuilder const &) | protocols::jumping::SheetBuilder | |
| SheetTopology typedef | protocols::jumping::SheetBuilder | |
| total_residue() const | protocols::jumping::SheetBuilder | inline |
| total_residue_ | protocols::jumping::SheetBuilder | private |
| type_name() const override | protocols::jumping::SheetBuilder | inlinevirtual |
| ~BaseJumpSetup() override | protocols::jumping::BaseJumpSetup | |
| ~SheetBuilder() override | protocols::jumping::SheetBuilder | |