protocols::task_operations::RestrictIdentitiesOperation Class Reference

#include <RestrictIdentitiesOperation.hh>

Inheritance diagram for protocols::task_operations::RestrictIdentitiesOperation:

Public Member Functions
	RestrictIdentitiesOperation ()
	RestrictIdentitiesOperation (utility::vector1< std::string > const &identities, bool prevent_repacking)
core::pack::task::operation::TaskOperationOP	clone () const override
	Create another task operation of the type matching the most-derived version of the class. More...
	~RestrictIdentitiesOperation () override
utility::vector1< std::string >	identities () const
bool	prevent_repacking () const
void	identities (utility::vector1< std::string > residues_vec)
void	prevent_repacking (bool const prevent_repacking)
void	apply (core::pose::Pose const &, core::pack::task::PackerTask &) const override
	Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
void	parse_tag (TagCOP, DataMap &) override
	Used to parse an xml-like tag to load parameters and properties. More...
Public Member Functions inherited from core::pack::task::operation::TaskOperation
	~TaskOperation () override
virtual void	provide_citation_info (basic::citation_manager::CitationCollectionList &) const
	Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
static std::string	keyname ()

Private Attributes
std::string	unparsed_identities_
utility::vector1< std::string >	identities_
bool	prevent_repacking_

Additional Inherited Members
Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagCOP	TagCOP
typedef basic::datacache::DataMap	DataMap
typedef pose::Pose	Pose

Detailed Description

this class is a TaskOperation to prevent repacking of residues not near an interface.

Constructor & Destructor Documentation

protocols::task_operations::RestrictIdentitiesOperation::RestrictIdentitiesOperation ( )

default

protocols::task_operations::RestrictIdentitiesOperation::RestrictIdentitiesOperation	(	utility::vector1< std::string > const &	identities,
		bool	prevent_repacking
	)

protocols::task_operations::RestrictIdentitiesOperation::~RestrictIdentitiesOperation ( )

overridedefault

Member Function Documentation

void protocols::task_operations::RestrictIdentitiesOperation::apply ( core::pose::Pose const &  , core::pack::task::PackerTask &    ) const

overridevirtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implements core::pack::task::operation::TaskOperation.

References identities_, core::conformation::Residue::name3(), core::pack::task::PackerTask::nonconst_residue_task(), core::pack::task::ResidueLevelTask::prevent_repacking(), prevent_repacking_, core::pose::Pose::residue(), core::pack::task::ResidueLevelTask::restrict_to_repacking(), core::pose::Pose::size(), and protocols::task_operations::TR().

core::pack::task::operation::TaskOperationOP protocols::task_operations::RestrictIdentitiesOperation::clone ( ) const

overridevirtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::TaskOperation.

utility::vector1< std::string > protocols::task_operations::RestrictIdentitiesOperation::identities

(

)

const

References identities_.

void protocols::task_operations::RestrictIdentitiesOperation::identities

(

utility::vector1< std::string >

residues_vec

)

References identities_.

static std::string protocols::task_operations::RestrictIdentitiesOperation::keyname ( )

inlinestatic

Referenced by protocols::task_operations::RestrictIdentitiesOperationCreator::keyname(), and provide_xml_schema().

void protocols::task_operations::RestrictIdentitiesOperation::parse_tag ( TagCOP  tag, DataMap &    )

overridevirtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

References identities_, prevent_repacking(), prevent_repacking_, protocols::task_operations::TR(), and unparsed_identities_.

bool protocols::task_operations::RestrictIdentitiesOperation::prevent_repacking

(

)

const

References prevent_repacking_.

Referenced by parse_tag(), and prevent_repacking().

void protocols::task_operations::RestrictIdentitiesOperation::prevent_repacking

(

bool const

prevent_repacking

)

References prevent_repacking(), and prevent_repacking_.

void protocols::task_operations::RestrictIdentitiesOperation::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd )

static

References keyname(), and core::pack::task::operation::task_op_schema_w_attributes().

Referenced by protocols::task_operations::RestrictIdentitiesOperationCreator::provide_xml_schema().

Member Data Documentation

utility::vector1< std::string > protocols::task_operations::RestrictIdentitiesOperation::identities_

private

Referenced by apply(), identities(), and parse_tag().

bool protocols::task_operations::RestrictIdentitiesOperation::prevent_repacking_

private

Referenced by apply(), parse_tag(), and prevent_repacking().

std::string protocols::task_operations::RestrictIdentitiesOperation::unparsed_identities_

private

Referenced by parse_tag().

---

The documentation for this class was generated from the following files:

• src/protocols/task_operations/RestrictIdentitiesOperation.hh
• src/protocols/task_operations/RestrictIdentitiesOperation.cc