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core::scoring::trie::RotamerTrieBase Member List

This is the complete list of members for core::scoring::trie::RotamerTrieBase, including all inherited members.

connection_exists_to_residue(Size resid) const core::scoring::trie::RotamerTrieBaseinline
connection_id_for_residue(Size resid) const core::scoring::trie::RotamerTrieBaseinline
get_count_pair_data_for_residue(Size other_residue) const core::scoring::trie::RotamerTrieBaseinline
print() const =0core::scoring::trie::RotamerTrieBasepure virtual
resid_2_connid_map_core::scoring::trie::RotamerTrieBaseprivate
resolve_trie_vs_path(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairDataGeneric > const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairDataGeneric > const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, hbonds::HBondEnergy const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< hbonds::hbtrie::HBAtom, hbonds::hbtrie::HBCPData > const &other, TrieCountPairBase &cp, hbonds::HBondEnergy const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< elec::electrie::ElecAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< elec::electrie::ElecAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< elec::electrie::ElecAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< elec::electrie::ElecAtom, etable::etrie::CountPairDataGeneric > const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< lkball::lkbtrie::LKBAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< lkball::lkbtrie::LKBAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< lkball::lkbtrie::LKBAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< lkball::lkbtrie::LKBAtom, etable::etrie::CountPairDataGeneric > const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< core::scoring::mm::mmtrie::MMEnergyTableAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< core::scoring::mm::mmtrie::MMEnergyTableAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< core::scoring::mm::mmtrie::MMEnergyTableAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< core::scoring::vdwaals::VDWAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< core::scoring::vdwaals::VDWAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrie< core::scoring::vdwaals::VDWAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairDataGeneric > const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< etable::etrie::EtableAtom, etable::etrie::CountPairDataGeneric > const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, hbonds::HBondEnergy const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< hbonds::hbtrie::HBAtom, hbonds::hbtrie::HBCPData > const &other, TrieCountPairBase &cp, hbonds::HBondEnergy const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< elec::electrie::ElecAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< elec::electrie::ElecAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< elec::electrie::ElecAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< elec::electrie::ElecAtom, etable::etrie::CountPairDataGeneric > const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< lkball::lkbtrie::LKBAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< lkball::lkbtrie::LKBAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< lkball::lkbtrie::LKBAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< lkball::lkbtrie::LKBAtom, etable::etrie::CountPairDataGeneric > const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< core::scoring::mm::mmtrie::MMEnergyTableAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< core::scoring::mm::mmtrie::MMEnergyTableAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< core::scoring::mm::mmtrie::MMEnergyTableAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< core::scoring::vdwaals::VDWAtom, etable::etrie::CountPairData_1_1 > const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< core::scoring::vdwaals::VDWAtom, etable::etrie::CountPairData_1_2 > const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrie< core::scoring::vdwaals::VDWAtom, etable::etrie::CountPairData_1_3 > const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
resolve_trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
set_resid_2_connection_entry(Size resid, Size connid)core::scoring::trie::RotamerTrieBaseinline
trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, hbonds::HBondEnergy const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_path(RotamerTrieBase const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, utility::vector1< core::PackerEnergy > &pair_energy_vector, utility::vector1< core::PackerEnergy > &temp_vector, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, etable::TableLookupEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, etable::AnalyticEtableEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, hbonds::HBondEnergy const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, elec::electrie::ElecTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, lkball::lkbtrie::LKBTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, methods::MMLJEnergyInter const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
trie_vs_trie(RotamerTrieBase const &other, TrieCountPairBase &cp, vdwaals::VDWTrieEvaluator const &sfxn, ObjexxFCL::FArray2D< core::PackerEnergy > &pair_energy_table, ObjexxFCL::FArray2D< core::PackerEnergy > &temp_table, TrieVsTrieCachedDataContainerBase const *const cached_data) const =0core::scoring::trie::RotamerTrieBasepure virtual
~AbstractRotamerTrie() override=defaultcore::conformation::AbstractRotamerTrie
~RotamerTrieBase() overridecore::scoring::trie::RotamerTrieBaseinline