| add_common_xml_elements(utility::tag::XMLSchemaDefinition &xsd, std::string const &class_name, std::string const &description, utility::tag::AttributeList &attlist) | protocols::denovo_design::components::SegmentPairing | protectedstatic |
| class_name() | protocols::denovo_design::components::StrandPairing | inlinestatic |
| clone() const override | protocols::denovo_design::components::StrandPairing | virtual |
| complex_type_name_for_pairing(std::string const &pairing_name) | protocols::denovo_design::components::SegmentPairing | static |
| create(std::string const &type_name) | protocols::denovo_design::components::SegmentPairing | static |
| get_helix_pairings(StructureData const &sd) | protocols::denovo_design::components::SegmentPairing | static |
| get_hss_triplets(StructureData const &sd) | protocols::denovo_design::components::SegmentPairing | static |
| get_strand_pairings(StructureData const &sd) | protocols::denovo_design::components::SegmentPairing | static |
| get_strand_residue_pairs(StructureData const &sd) | protocols::denovo_design::components::SegmentPairing | static |
| has_segment(std::string const &segment) const | protocols::denovo_design::components::SegmentPairing | |
| HELIX enum value | protocols::denovo_design::components::SegmentPairing | |
| HELIX_SHEET enum value | protocols::denovo_design::components::SegmentPairing | |
| nobu_register_shift(StructureData const &sd, protocols::fldsgn::topology::Strand const &s1, protocols::fldsgn::topology::Strand const &s2, RegisterShift const nc_order_shift, StrandOrientation const &nc_order_orient) const | protocols::denovo_design::components::StrandPairing | private |
| orient1() const | protocols::denovo_design::components::StrandPairing | |
| orient1_ | protocols::denovo_design::components::StrandPairing | private |
| orient2() const | protocols::denovo_design::components::StrandPairing | |
| orient2_ | protocols::denovo_design::components::StrandPairing | private |
| pairing_string(StructureData const &sd) const override | protocols::denovo_design::components::StrandPairing | virtual |
| PairingType enum name | protocols::denovo_design::components::SegmentPairing | |
| parallel() const | protocols::denovo_design::components::StrandPairing | |
| parse_my_tag(utility::tag::Tag const &tag) | protocols::denovo_design::components::SegmentPairing | |
| parse_tag(utility::tag::Tag const &tag) override | protocols::denovo_design::components::StrandPairing | protectedvirtual |
| provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | protocols::denovo_design::components::StrandPairing | static |
| SegmentPairing() | protocols::denovo_design::components::SegmentPairing | |
| SegmentPairing(SegmentNames const &paired_segments) | protocols::denovo_design::components::SegmentPairing | |
| segments() const | protocols::denovo_design::components::SegmentPairing | |
| set_orient1(StrandOrientation const orient) | protocols::denovo_design::components::StrandPairing | inline |
| set_orient2(StrandOrientation const orient) | protocols::denovo_design::components::StrandPairing | inline |
| set_segments(std::string const &segments_str) | protocols::denovo_design::components::SegmentPairing | |
| set_segments(SegmentNames const &segments) | protocols::denovo_design::components::SegmentPairing | |
| set_shift(RegisterShift const shift) | protocols::denovo_design::components::StrandPairing | inline |
| shift() const | protocols::denovo_design::components::StrandPairing | |
| shift_ | protocols::denovo_design::components::StrandPairing | private |
| STRAND enum value | protocols::denovo_design::components::SegmentPairing | |
| StrandPairing() | protocols::denovo_design::components::StrandPairing | |
| StrandPairing(SegmentName const &s1, SegmentName const &s2, StrandOrientation const &orient1, StrandOrientation const &orient2, RegisterShift const &shift) | protocols::denovo_design::components::StrandPairing | |
| TAG_NAME | protocols::denovo_design::components::SegmentPairing | static |
| to_xml(utility::tag::Tag &tag) const override | protocols::denovo_design::components::StrandPairing | protectedvirtual |
| type() const override | protocols::denovo_design::components::StrandPairing | inlinevirtual |
| UNKNOWN enum value | protocols::denovo_design::components::SegmentPairing | |
| ~SegmentPairing() override | protocols::denovo_design::components::SegmentPairing | inline |
| ~StrandPairing() override | protocols::denovo_design::components::StrandPairing | inline |
1.8.7