core::scoring::constraints::ResidueCouplingConstraint Member List

This is the complete list of members for core::scoring::constraints::ResidueCouplingConstraint, including all inherited members.

alphabet_	core::scoring::constraints::ResidueCouplingConstraint	private
amino_acids_	core::scoring::constraints::ResidueCouplingConstraint	private
atom(Size const ) const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
AtomID typedef	core::scoring::constraints::Constraint
choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &)	core::scoring::constraints::Constraint	virtual
clone() const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
core::scoring::constraints::Constraint::clone(func::FuncOP) const	core::scoring::constraints::Constraint	virtual
Constraint(ScoreType const &t)	core::scoring::constraints::Constraint
dist(core::scoring::func::XYZ_Func const &xyz) const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
core::scoring::constraints::Constraint::dist(core::pose::Pose const &) const	core::scoring::constraints::Constraint	virtual
effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const	core::scoring::constraints::Constraint	virtual
fill_f1_f2(AtomID const &atom, func::XYZ_Func const &xyz, Vector &F1, Vector &F2, EnergyMap const &weights) const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
get_alphabet() const	core::scoring::constraints::ResidueCouplingConstraint
get_func() const	core::scoring::constraints::Constraint	virtual
natoms() const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
operator!=(Constraint const &other) const	core::scoring::constraints::Constraint
operator==(Constraint const &other) const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
read_constraint(std::istream &, core::pose::Pose const &)	core::scoring::constraints::Constraint	virtual
read_data(std::istream &)	core::scoring::constraints::Constraint	virtual
read_def(std::istream &, pose::Pose const &, core::scoring::func::FuncFactory const &)	core::scoring::constraints::Constraint	virtual
Real typedef	core::scoring::constraints::ResidueCouplingConstraint
remap_resid(core::id::SequenceMapping const &) const	core::scoring::constraints::Constraint	virtual
remapped_clone(pose::Pose const &, pose::Pose const &, id::SequenceMappingCOP map) const	core::scoring::constraints::Constraint	virtual
ResidueCouplingConstraint()	core::scoring::constraints::ResidueCouplingConstraint
ResidueCouplingConstraint(pose::Pose const &pose, Size const &seqpos1, Size const &seqpos2, Size const &tensor_index1, Size const &tensor_index2, CouplingTensorCOP const &tensor_const, Real const &strength, std::string const &alphabet)	core::scoring::constraints::ResidueCouplingConstraint
residues() const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
same_type_as_me(Constraint const &) const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
score(func::XYZ_Func const &xyz_func, EnergyMap const &weights, EnergyMap &emap) const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose) const	core::scoring::constraints::Constraint	virtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose, EnergyMap const &weights) const	core::scoring::constraints::Constraint	virtual
score_type() const	core::scoring::constraints::Constraint	inline
seqpos1_	core::scoring::constraints::ResidueCouplingConstraint	private
seqpos2_	core::scoring::constraints::ResidueCouplingConstraint	private
set_alphabet(std::string const &alphabet)	core::scoring::constraints::ResidueCouplingConstraint
setup_for_derivatives(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	virtual
setup_for_scoring(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	virtual
show(std::ostream &out) const override	core::scoring::constraints::ResidueCouplingConstraint	virtual
show_def(std::ostream &, pose::Pose const &) const	core::scoring::constraints::Constraint	virtual
show_violations(std::ostream &out, pose::Pose const &, Size, Real threshold=1) const	core::scoring::constraints::Constraint	virtual
steal_def(pose::Pose const &)	core::scoring::constraints::Constraint	virtual
strength_	core::scoring::constraints::ResidueCouplingConstraint	private
tensor_const_	core::scoring::constraints::ResidueCouplingConstraint	private
tensor_index1_	core::scoring::constraints::ResidueCouplingConstraint	private
tensor_index2_	core::scoring::constraints::ResidueCouplingConstraint	private
to_string() const	core::scoring::constraints::Constraint
type() const	core::scoring::constraints::Constraint	virtual
~Constraint() override	core::scoring::constraints::Constraint
~ResidueCouplingConstraint() override	core::scoring::constraints::ResidueCouplingConstraint