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Rosetta
2021.16
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Rosetta
2021.16
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#include <PoseInputStreamJobInputter.hh>
Public Member Functions | |
| PoseInputStreamJobInputter () | |
| ~PoseInputStreamJobInputter () override | |
| void | pose_from_job (core::pose::Pose &pose, JobOP job) override |
| This implementation simply calls fill_pose on the PoseInputStream object. More... | |
| void | fill_jobs (JobsContainer &jobs) override |
| JobInputterInputSource::Enum | input_source () const override |
| Return the type of input source that the PoseInputStreamJobInputter is currently using. More... | |
 Public Member Functions inherited from protocols::jd2::JobInputter | |
| ~JobInputter () override | |
| JobInputterCOP | get_self_ptr () const |
| Get self const owning pointers. More... | |
| JobInputterOP | get_self_ptr () |
| Get self owning pointers. More... | |
| JobInputterCAP | get_self_weak_ptr () const |
| Get self const weak pointers. More... | |
| JobInputterAP | get_self_weak_ptr () |
| Get self weak pointers. More... | |
| virtual void | update_jobs_list (JobsContainerOP jobs) |
| This function is only called by certain JobInputters to update the jobs list after it has already been created. More... | |
| virtual bool | updates_jobs_list () const |
| Does this type of JobInputter update the jobs list? More... | |
Private Attributes | |
| core::chemical::ResidueTypeSetCOP | rsd_set_ |
| core::import_pose::pose_stream::MetaPoseInputStream | input_ |
Additional Inherited Members | |
| Static Public Member Functions inherited from protocols::jd2::JobInputter | |
| static std::string | job_inputter_input_source_to_string (JobInputterInputSource::Enum source) |
| call this with input_source() to get the input source of a particular job inputter More... | |
| Protected Member Functions inherited from protocols::jd2::JobInputter | |
| void | load_pose_into_job (core::pose::Pose const &pose, JobOP job) |
| this function modifies the InnerJob's pose. Access to that pose is via friendship. More... | |
| void | load_pose_into_job (core::pose::PoseCOP pose, JobOP job) |
| this function modifies the InnerJob's pose. Access to that pose is via friendship. More... | |
| virtual core::Size | get_nstruct () const |
| this code is here to restrict the use of inner_job_nonconst (this class is a friend class and can do it) More... | |
This is the simplest implementation of JobInputter, which reads from -s/-l and SilentFile files.
| protocols::jd2::PoseInputStreamJobInputter::PoseInputStreamJobInputter | ( | ) |
References protocols::jd2::tr().
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overridedefault |
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overridevirtual |
this function determines what jobs exist from -in::file::silent and -in::file::tags
Implements protocols::jd2::JobInputter.
References protocols::jd2::JobsContainer::clear(), input_, protocols::jd2::JobsContainer::push_back(), rsd_set_, core::chemical::rsd_set_from_cmd_line(), core::import_pose::pose_stream::streams_from_cmd_line(), and protocols::jd2::tr().
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overridevirtual |
Return the type of input source that the PoseInputStreamJobInputter is currently using.
Implements protocols::jd2::JobInputter.
References protocols::jd2::JobInputterInputSource::UNKNOWN.
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overridevirtual |
This implementation simply calls fill_pose on the PoseInputStream object.
Implements protocols::jd2::JobInputter.
References core::pose::Pose::clear(), core::import_pose::pose_stream::MetaPoseInputStream::fill_pose(), core::import_pose::pose_stream::MetaPoseInputStream::has_another_pose(), input_, rsd_set_, and protocols::jd2::tr().
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private |
Referenced by fill_jobs(), and pose_from_job().
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private |
Referenced by fill_jobs(), and pose_from_job().
1.8.7