core::scoring::constraints::AtomToAxisConstraint Member List

This is the complete list of members for core::scoring::constraints::AtomToAxisConstraint, including all inherited members.

add_atom_to_axis1(AtomID const &newid)	core::scoring::constraints::AtomToAxisConstraint	inlineprotected
add_atom_to_axis2(AtomID const &newid)	core::scoring::constraints::AtomToAxisConstraint	inlineprotected
atom(core::Size const ii) const override	core::scoring::constraints::AtomToAxisConstraint	inlinevirtual
atom(AtomID const &newid)	core::scoring::constraints::AtomToAxisConstraint	inlineprotected
atom_	core::scoring::constraints::AtomToAxisConstraint	private
AtomID typedef	core::scoring::constraints::Constraint
AtomToAxisConstraint()	core::scoring::constraints::AtomToAxisConstraint
AtomToAxisConstraint(AtomID const &a, utility::vector1< AtomID > const &axis1, utility::vector1< AtomID > const &axis2, core::scoring::func::FuncOP const &func, ScoreType scoretype=atom_pair_constraint)	core::scoring::constraints::AtomToAxisConstraint
AtomToAxisConstraint(AtomToAxisConstraint const &)=default	core::scoring::constraints::AtomToAxisConstraint
axis1_	core::scoring::constraints::AtomToAxisConstraint	private
axis2_	core::scoring::constraints::AtomToAxisConstraint	private
calc_xyzs(pose::Pose const &pose) const	core::scoring::constraints::AtomToAxisConstraint
calc_xyzs(core::scoring::func::XYZ_Func const &xyz) const	core::scoring::constraints::AtomToAxisConstraint
choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &)	core::scoring::constraints::Constraint	virtual
clone() const override	core::scoring::constraints::AtomToAxisConstraint	virtual
clone(func::FuncOP func) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
Constraint(ScoreType const &t)	core::scoring::constraints::Constraint
dfunc(Real const theta) const	core::scoring::constraints::AtomToAxisConstraint	private
dist(pose::Pose const &pose) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
dist(core::scoring::func::XYZ_Func const &xyz) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const	core::scoring::constraints::Constraint	virtual
fill_f1_f2(AtomID const &atom, core::scoring::func::XYZ_Func const &xyz, Vector &F1, Vector &F2, EnergyMap const &weights) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
func(Real const theta) const	core::scoring::constraints::AtomToAxisConstraint	private
func_	core::scoring::constraints::AtomToAxisConstraint	private
get_atom() const	core::scoring::constraints::AtomToAxisConstraint	inline
get_func() const override	core::scoring::constraints::AtomToAxisConstraint	virtual
natoms() const override	core::scoring::constraints::AtomToAxisConstraint	inlinevirtual
operator!=(Constraint const &other) const	core::scoring::constraints::Constraint
operator==(Constraint const &other) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
read_constraint(std::istream &, core::pose::Pose const &)	core::scoring::constraints::Constraint	virtual
read_data(std::istream &)	core::scoring::constraints::Constraint	virtual
read_def(std::istream &in, pose::Pose const &pose, func::FuncFactory const &func_factory) override	core::scoring::constraints::AtomToAxisConstraint	virtual
remap_resid(core::id::SequenceMapping const &seqmap) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
remapped_clone(pose::Pose const &src, pose::Pose const &dest, id::SequenceMappingCOP map=nullptr) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
residues() const	core::scoring::constraints::Constraint	virtual
same_type_as_me(Constraint const &other) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
score(Vector const &xyz1, Vector const &xyz2) const	core::scoring::constraints::AtomToAxisConstraint
score(core::scoring::func::XYZ_Func const &xyz, EnergyMap const &, EnergyMap &emap) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
score(pose::Pose const &pose) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose, EnergyMap const &weights) const	core::scoring::constraints::Constraint	virtual
score_type() const	core::scoring::constraints::Constraint	inline
set_func(func::FuncOP setting)	core::scoring::constraints::AtomToAxisConstraint	protected
setup_for_derivatives(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	virtual
setup_for_scoring(func::XYZ_Func const &, ScoreFunction const &) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
show(std::ostream &out) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
show_def(std::ostream &out, pose::Pose const &pose) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
show_violations(std::ostream &out, pose::Pose const &pose, Size verbose_level, Real threshold=1) const override	core::scoring::constraints::AtomToAxisConstraint	virtual
steal_def(pose::Pose const &)	core::scoring::constraints::Constraint	virtual
to_string() const	core::scoring::constraints::Constraint
type() const override	core::scoring::constraints::AtomToAxisConstraint	inlinevirtual
~Constraint() override	core::scoring::constraints::Constraint