| AA typedef | protocols::optimize_weights::DDGBindOptEData | |
| add_mutant_complex(SingleStructureDataOP mut) | protocols::optimize_weights::DDGBindOptEData | |
| add_mutant_unbounds(SingleStructureDataOP mut) | protocols::optimize_weights::DDGBindOptEData | |
| add_mutation(std::pair< core::Size, std::pair< AA, AA > > mutation) | protocols::optimize_weights::DDGBindOptEData | |
| add_wt_complex(SingleStructureDataOP wt) | protocols::optimize_weights::DDGBindOptEData | |
| add_wt_unbounds(SingleStructureDataOP wt) | protocols::optimize_weights::DDGBindOptEData | |
| DDG_Bind_File_Index enum name | protocols::optimize_weights::DDGBindOptEData | |
| DDGBindOptEData() | protocols::optimize_weights::DDGBindOptEData | |
| EnergyMap typedef | protocols::optimize_weights::OptEPositionData | |
| experimental_ddG_bind_ | protocols::optimize_weights::DDGBindOptEData | private |
| get_score(Multivec const &component_weights, Multivec const &vars, Multivec &dE_dvars, core::Size const num_energy_dofs, int const num_ref_dofs, int const num_total_dofs, EnergyMap const &fixed_terms, ScoreTypes const &score_list, ScoreTypes const &fixed_score_list) const override | protocols::optimize_weights::DDGBindOptEData | virtual |
| memory_use() const override | protocols::optimize_weights::DDGBindOptEData | virtual |
| Multivec typedef | protocols::optimize_weights::OptEPositionData | |
| MUT_COMPLEXES_LIST_FILE enum value | protocols::optimize_weights::DDGBindOptEData | |
| MUT_UNBOUNDS_LIST_FILE enum value | protocols::optimize_weights::DDGBindOptEData | |
| mutant_complexes_ | protocols::optimize_weights::DDGBindOptEData | private |
| mutant_unbounds_ | protocols::optimize_weights::DDGBindOptEData | private |
| mutations_ | protocols::optimize_weights::DDGBindOptEData | private |
| OptEPositionData() | protocols::optimize_weights::OptEPositionData | |
| print_score(std::ostream &ostr, Multivec const &component_weights, Multivec const &vars, Multivec &dE_dvars, core::Size const num_energy_dofs, int const num_ref_dofs, int const num_total_dofs, EnergyMap const &fixed_terms, ScoreTypes const &score_list, ScoreTypes const &fixed_score_list) const override | protocols::optimize_weights::DDGBindOptEData | virtual |
| process_score(std::ostream &ostr, bool print, Multivec const &component_weights, Multivec const &vars, Multivec &dE_dvars, core::Size const num_energy_dofs, int const num_ref_dofs, int const num_total_dofs, EnergyMap const &fixed_terms, ScoreTypes const &score_list, ScoreTypes const &fixed_score_list) const | protocols::optimize_weights::DDGBindOptEData | |
| range(ScoreTypes const &free_score_list, ScoreTypes const &fixed_score_list, EnergyMap &lower_bound, EnergyMap &upper_bound) const override | protocols::optimize_weights::DDGBindOptEData | virtual |
| read_from_binary_file(std::ifstream &) override | protocols::optimize_weights::DDGBindOptEData | inlinevirtual |
| read_from_file(std::ifstream &) override | protocols::optimize_weights::DDGBindOptEData | inlinevirtual |
| Real typedef | protocols::optimize_weights::OptEPositionData | |
| ScoreTypes typedef | protocols::optimize_weights::OptEPositionData | |
| set_experimental_ddg_bind(Real exp_ddg_bind) | protocols::optimize_weights::DDGBindOptEData | |
| size() const override | protocols::optimize_weights::DDGBindOptEData | virtual |
| Size typedef | protocols::optimize_weights::OptEPositionData | |
| tag(std::string const &tag_in) | protocols::optimize_weights::OptEPositionData | |
| tag() const | protocols::optimize_weights::OptEPositionData | |
| type() const override | protocols::optimize_weights::DDGBindOptEData | virtual |
| update_range(SingleStructureDataCOP structure, ScoreTypes const &free_score_list, ScoreTypes const &fixed_score_list, EnergyMap &lower_bound, EnergyMap &upper_bound) const | protocols::optimize_weights::OptEPositionData | protected |
| write_to_binary_file(std::ofstream &) const override | protocols::optimize_weights::DDGBindOptEData | inlinevirtual |
| write_to_file(std::ofstream &) const override | protocols::optimize_weights::DDGBindOptEData | inlinevirtual |
| wt_complexes_ | protocols::optimize_weights::DDGBindOptEData | private |
| WT_COMPLEXES_LIST_FILE enum value | protocols::optimize_weights::DDGBindOptEData | |
| wt_unbounds_ | protocols::optimize_weights::DDGBindOptEData | private |
| WT_UNBOUNDS_LIST_FILE enum value | protocols::optimize_weights::DDGBindOptEData | |
| ~DDGBindOptEData() override | protocols::optimize_weights::DDGBindOptEData | |
| ~OptEPositionData() override | protocols::optimize_weights::OptEPositionData | |