ImplicitLipidInfo.hh File Reference

An Implicit Lipid Membrane Model. More...

#include <core/conformation/membrane/ImplicitLipidInfo.fwd.hh>
#include <core/conformation/membrane/MembraneInfo.hh>
#include <core/conformation/membrane/SpanningTopology.fwd.hh>
#include <core/conformation/membrane/AqueousPoreParameters.fwd.hh>
#include <core/types.hh>
#include <numeric/MathMatrix.hh>
#include <numeric/xyzVector.hh>
#include <numeric/cubic_polynomial.hh>
#include <utility/pointer/owning_ptr.hh>
#include <utility/VirtualBase.hh>

Classes
class	core::conformation::membrane::ImplicitLipidInfo
	Definition of an implicit membrane with parameters for different lipid compositions. More...

Namespaces
	core
	A class for reading in the atom type properties.
	core::conformation
	core::conformation::membrane

Detailed Description

An Implicit Lipid Membrane Model.

Version

menv-franklin2018 [Alford] et al. (2019) "A thermodynamically-inspired, biologically-driven energy function for membrane protein modeling and design"

This class defines physical and chemical properties of the membrane environment. It is mainly used by the membrane energy function.

1. Parameters of the hydration function (e.g. thickness, rate, of transition, pore size)
2. Lipid composition details
3. Hydration function smoothing parameters
4. Structure-based lipid accessibiity information

Author

Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)

Version

menv-franklin2018

This class defines physical and chemical properties of the membrane environment. It is mainly used by the membrane energy function.

1. Parameters of the hydration function (e.g. thickness, rate, of transition, pore size)
2. Lipid composition details
3. Hydration function smoothing parameters
4. Structure-based lipid accessibiity information

Author

Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)