#include <TMsAACompFilter.hh>

Inheritance diagram for protocols::simple_filters::TMsAACompFilter:

Public Member Functions
	TMsAACompFilter ()

bool	apply (core::pose::Pose const &pose) const override
	Returns true if the given pose passes the filter, false otherwise. More...

void	report (std::ostream &out, core::pose::Pose const &pose) const override

core::Real	report_sm (core::pose::Pose const &pose) const override
	used to report filter internals through a score or silent file More...

core::Real	compute (core::pose::Pose const &pose) const

std::map< const char, core::Real >	find_aa_composition (core::pose::Pose const &pose, core::Size start, core::Size end) const

filters::FilterOP	clone () const override

filters::FilterOP	fresh_instance () const override

	~TMsAACompFilter () override

void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override
	Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing. More...

std::string	name () const override

Public Member Functions inherited from protocols::filters::Filter
	Filter ()

	Filter (std::string const &)

	Filter (Filter const &)

	~Filter () override

virtual std::string	get_type () const

std::string	get_user_defined_name () const

void	set_user_defined_name (std::string const &name)

virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...

virtual core::Real	score (core::pose::Pose &pose)

virtual void	provide_citation_info (basic::citation_manager::CitationCollectionList &) const
	Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions
static std::string	class_name ()

static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

Private Attributes
core::Real	threshold_ = 0.5

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Constructor & Destructor Documentation

protocols::simple_filters::TMsAACompFilter::TMsAACompFilter ( )

inline

protocols::simple_filters::TMsAACompFilter::~TMsAACompFilter ( )

override

Member Function Documentation

bool protocols::simple_filters::TMsAACompFilter::apply ( core::pose::Pose const & pose ) const

overridevirtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References compute(), and threshold_.

std::string protocols::simple_filters::TMsAACompFilter::class_name ( )

static

Referenced by name(), and provide_xml_schema().

filters::FilterOP protocols::simple_filters::TMsAACompFilter::clone ( ) const

inlineoverridevirtual

Implements protocols::filters::Filter.

core::Real protocols::simple_filters::TMsAACompFilter::compute ( core::pose::Pose const & pose ) const

References core::pack::dunbrack::c, core::energy_methods::MPSpanInsertionEnergy::create_updated_span(), core::sequence::end, find_aa_composition(), protocols::loops::start, and protocols::simple_filters::TR().

Referenced by apply(), report(), and report_sm().

std::map< const char, core::Real > protocols::simple_filters::TMsAACompFilter::find_aa_composition	(	core::pose::Pose const &	pose,
		core::Size	start,
		core::Size	end
	)		const