core::io::raw_data::ScoreStructJSON Class Reference

#include <ScoreStructJSON.hh>

Inheritance diagram for core::io::raw_data::ScoreStructJSON:

Public Member Functions
	ScoreStructJSON (core::pose::Pose, std::string tag)
void	fill_pose (core::pose::Pose &) override
	Fill a Pose with the conformation information in this RawStruct and the FA_STANDARD ResidueTypeSet. This is a virtual method which must be implemented by classes derived from RawStruct. More...
void	fill_pose (core::pose::Pose &, core::chemical::ResidueTypeSet const &) override
	Fill a Pose with the conformation information in this RawStruct and the ResidueTypeSet provided by the caller. This is a virtual method which must be implemented by classes derived from RawStruct. More...
void	print_conformation (std::ostream &) const override
Real	get_debug_rmsd () override
	Do some sort of comparison between the actual RMSD of this silent-struct and the cached coordinates. Used for RawStruct objects that are rebuild from torsions or other shortened representations of data. More...
void	print_header (std::ostream &, std::map< std::string, core::Real > const &, std::map< std::string, std::string > const &, bool) const override
	print out a header line to the given ozstream. In a rosetta++ silent-file, this contained the lines SEQUENCE: <protein sequence>="">: More...
void	print_scores (std::ostream &out, std::map< std::string, core::Real > const &score_map, std::map< std::string, std::string > const &string_map=(std::map< std::string, std::string >())) const override
	print out a SCORE line to the given ozstream. More...
Public Member Functions inherited from core::io::raw_data::RawStruct
	~RawStruct () override
Size	nres ()
	data access methods. More...
std::string	decoy_tag ()
	returns the tag associated with this RawStruct More...
std::string	sequence ()
	returns the sequence for this RawStruct More...
void	nres (Size nres)
	returns the number of residues in this RawStruct More...
void	decoy_tag (std::string tag)
	sets the tag associated with this RawStruct More...
void	sequence (std::string sequence)
	sets the sequence for this RawStruct More...

Additional Inherited Members
Protected Attributes inherited from core::io::raw_data::RawStruct
Size	nres_
std::string	decoy_tag_
std::string	sequence_

Constructor & Destructor Documentation

core::io::raw_data::ScoreStructJSON::ScoreStructJSON	(	core::pose::Pose	,
		std::string	tag
	)

References core::io::raw_data::RawStruct::decoy_tag_.

Member Function Documentation

void core::io::raw_data::ScoreStructJSON::fill_pose ( core::pose::Pose &  pose )

inlineoverridevirtual

Fill a Pose with the conformation information in this RawStruct and the FA_STANDARD ResidueTypeSet. This is a virtual method which must be implemented by classes derived from RawStruct.

Implements core::io::raw_data::RawStruct.

void core::io::raw_data::ScoreStructJSON::fill_pose ( core::pose::Pose &  pose, core::chemical::ResidueTypeSet const &  residue_set  )

inlineoverridevirtual

Fill a Pose with the conformation information in this RawStruct and the ResidueTypeSet provided by the caller. This is a virtual method which must be implemented by classes derived from RawStruct.

Implements core::io::raw_data::RawStruct.

Real core::io::raw_data::ScoreStructJSON::get_debug_rmsd ( )

inlineoverridevirtual

Do some sort of comparison between the actual RMSD of this silent-struct and the cached coordinates. Used for RawStruct objects that are rebuild from torsions or other shortened representations of data.

Reimplemented from core::io::raw_data::RawStruct.

void core::io::raw_data::ScoreStructJSON::print_conformation ( std::ostream &  ) const

inlineoverridevirtual

Reimplemented from core::io::raw_data::RawStruct.

void core::io::raw_data::ScoreStructJSON::print_header ( std::ostream &  out, std::map< std::string, core::Real > const &  score_map, std::map< std::string, std::string > const &  string_map, bool  print_sequence  ) const

inlineoverridevirtual

print out a header line to the given ozstream. In a rosetta++ silent-file, this contained the lines SEQUENCE: <protein sequence>="">:

Reimplemented from core::io::raw_data::RawStruct.

void core::io::raw_data::ScoreStructJSON::print_scores ( std::ostream &  out, std::map< std::string, core::Real > const &  score_map, std::map< std::string, std::string > const &  string_map = ( std::map < std::string, std::string > () )  ) const

overridevirtual

print out a SCORE line to the given ozstream.

Reimplemented from core::io::raw_data::RawStruct.

References core::io::raw_data::RawStruct::decoy_tag_.

---

The documentation for this class was generated from the following files:

• src/core/io/raw_data/ScoreStructJSON.hh
• src/core/io/raw_data/ScoreStructJSON.cc