core::scoring::epr_deer::Simulated4PDEERTrace Class Reference

#include <Simulated4PDEERTrace.hh>

Public Member Functions
	Simulated4PDEERTrace ()=default
	Default constructor. More...
	~Simulated4PDEERTrace ()=default
	Destructor. More...
	Simulated4PDEERTrace (Simulated4PDEERTrace const &rhs)
	Default copy constructor. More...
	Simulated4PDEERTrace (utility::vector1< Real > const &deer_trace, utility::vector1< Real > const &deer_trace_intra, utility::vector1< Real > const &time_pts, Real const &depth, Real const &slope, Real const &dim)
	Constructor that instantiates everything. More...
Simulated4PDEERTrace &	operator= (Simulated4PDEERTrace const &rhs)
	Copy assignment operator. More...
std::tuple< Real, Real, Real >	operator[] (Size const &i) const
utility::vector1< Real >	deer_trace () const
	DEER trace getter. More...
utility::vector1< Real >	deer_trace_intra () const
	Intramolecular DEER trace getter. More...
utility::vector1< Real >	time_pts () const
	Time point getter. More...
Real	depth () const
	Modulation depth getter. More...
Real	slope () const
	Background slope getter. More...
Real	dim () const
	Background dimensionality getter. More...
Size	size () const
	Return size of DEER trace. More...
void	deer_trace (utility::vector1< Real > const &val)
	Final DEER trace setter. More...
void	deer_trace_intra (utility::vector1< Real > const &val)
	Intramolecular DEER trace setter. More...
void	time_pts (utility::vector1< Real > const &val)
	Time point vector setter. More...
void	depth (Real const &val)
	Modulation depth setter. More...
void	slope (Real const &val)
	Background slope setter. More...
void	dim (Real const &val)
	Dimensionality setter. More...

Private Attributes
utility::vector1< Real >	deer_trace_
	Final DEER trace. More...
utility::vector1< Real >	deer_trace_intra_
	Intramolecular DEER trace (no background) More...
utility::vector1< Real >	time_pts_
	Time points for DEER traces. More...
Real	depth_
	Modulation depth in final DEER trace. More...
Real	slope_
	Background slope of final DEER trace. More...
Real	dim_
	Background dimensionality of final DEER trace. More...

Constructor & Destructor Documentation

core::scoring::epr_deer::Simulated4PDEERTrace::Simulated4PDEERTrace ( )

default

Default constructor.

core::scoring::epr_deer::Simulated4PDEERTrace::~Simulated4PDEERTrace ( )

default

Destructor.

core::scoring::epr_deer::Simulated4PDEERTrace::Simulated4PDEERTrace

(

Simulated4PDEERTrace const &

rhs

)

Default copy constructor.

Parameters

rhs

To copy

References deer_trace_, deer_trace_intra_, and time_pts_.

core::scoring::epr_deer::Simulated4PDEERTrace::Simulated4PDEERTrace	(	utility::vector1< Real > const &	deer_trace,
		utility::vector1< Real > const &	deer_trace_intra,
		utility::vector1< Real > const &	time_pts,
		Real const &	depth,
		Real const &	slope,
		Real const &	dim
	)

Constructor that instantiates everything.

Parameters

deer_trace	The final DEER trace
deer_trace_intra	The intramolecular DEER trace
time_pts	Time points for the DEER trace
depth	Modulation depth
slope	Background slope
dim	Background dimensionality

References deer_trace_, deer_trace_intra_, and time_pts_.

Member Function Documentation

utility::vector1< Real > core::scoring::epr_deer::Simulated4PDEERTrace::deer_trace

(

)

const

DEER trace getter.

Returns

The final DEER trace

References deer_trace_.

Referenced by operator=().

void core::scoring::epr_deer::Simulated4PDEERTrace::deer_trace

(

utility::vector1< Real > const &

val

)

Final DEER trace setter.

Parameters

deer_trace

The final DEER trace

References deer_trace_, and protocols::hybridization::val.

utility::vector1< Real > core::scoring::epr_deer::Simulated4PDEERTrace::deer_trace_intra

(

)

const

Intramolecular DEER trace getter.

Returns

The intramolecular DEER trace

References deer_trace_intra_.

Referenced by operator=().

void core::scoring::epr_deer::Simulated4PDEERTrace::deer_trace_intra

(

utility::vector1< Real > const &

val

)

Intramolecular DEER trace setter.

Parameters

deer_trace_intra

The intramolecular DEER trace

References deer_trace_intra_, and protocols::hybridization::val.

Real core::scoring::epr_deer::Simulated4PDEERTrace::depth

(

)

const

Modulation depth getter.

Returns

Modulation depth

References depth_.

Referenced by operator=().

void core::scoring::epr_deer::Simulated4PDEERTrace::depth

(

Real const &

val

)

Modulation depth setter.

Parameters

depth

Modulation depth

References depth_, and protocols::hybridization::val.

Real core::scoring::epr_deer::Simulated4PDEERTrace::dim

(

)

const

Background dimensionality getter.

Returns

Background dimensionality

References dim_.

Referenced by operator=().

void core::scoring::epr_deer::Simulated4PDEERTrace::dim

(

Real const &

val

)

Dimensionality setter.

Parameters

dim	Background dimensionality

References dim_, and protocols::hybridization::val.

Simulated4PDEERTrace & core::scoring::epr_deer::Simulated4PDEERTrace::operator=

(

Simulated4PDEERTrace const &

rhs

)

Copy assignment operator.

Parameters

rhs	Trace object to copy

Returns

Copy

References deer_trace(), deer_trace_intra(), depth(), dim(), slope(), and time_pts().

std::tuple< Real, Real, Real > core::scoring::epr_deer::Simulated4PDEERTrace::operator[]

(

Size const &

i

)

const

References deer_trace_, deer_trace_intra_, and time_pts_.

Size core::scoring::epr_deer::Simulated4PDEERTrace::size

(

)

const

Return size of DEER trace.

Returns

Size of DEER trace

References deer_trace_.

Real core::scoring::epr_deer::Simulated4PDEERTrace::slope

(

)

const

Background slope getter.

Returns

Background slope

References slope_.

Referenced by operator=().

void core::scoring::epr_deer::Simulated4PDEERTrace::slope

(

Real const &

val

)

Background slope setter.

Parameters

slope

Background slope

References slope_, and protocols::hybridization::val.

utility::vector1< Real > core::scoring::epr_deer::Simulated4PDEERTrace::time_pts

(

)

const

Time point getter.

Returns

Time points for the DEER trace

References time_pts_.

Referenced by operator=().

void core::scoring::epr_deer::Simulated4PDEERTrace::time_pts

(

utility::vector1< Real > const &

val

)

Time point vector setter.

Parameters

time_pts

Time points for the DEER trace

References time_pts_, and protocols::hybridization::val.

Member Data Documentation

utility::vector1< Real > core::scoring::epr_deer::Simulated4PDEERTrace::deer_trace_

private

Final DEER trace.

Referenced by deer_trace(), operator[](), Simulated4PDEERTrace(), and size().

utility::vector1< Real > core::scoring::epr_deer::Simulated4PDEERTrace::deer_trace_intra_

private

Intramolecular DEER trace (no background)

Referenced by deer_trace_intra(), operator[](), and Simulated4PDEERTrace().

Real core::scoring::epr_deer::Simulated4PDEERTrace::depth_

private

Modulation depth in final DEER trace.

Referenced by depth().

Real core::scoring::epr_deer::Simulated4PDEERTrace::dim_

private

Background dimensionality of final DEER trace.

Referenced by dim().

Real core::scoring::epr_deer::Simulated4PDEERTrace::slope_

private

Background slope of final DEER trace.

Referenced by slope().

utility::vector1< Real > core::scoring::epr_deer::Simulated4PDEERTrace::time_pts_

private

Time points for DEER traces.

Referenced by operator[](), Simulated4PDEERTrace(), and time_pts().

---

The documentation for this class was generated from the following files:

• src/core/scoring/epr_deer/Simulated4PDEERTrace.hh
• src/core/scoring/epr_deer/Simulated4PDEERTrace.cc