cryst_rms.cc File Reference

#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/util.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/io/CrystInfo.hh>
#include <core/id/AtomID.hh>
#include <core/id/AtomID_Map.hh>
#include <protocols/cryst/spacegroup.hh>
#include <protocols/cryst/refinable_lattice.hh>
#include <utility/vector1.hh>
#include <utility/io/izstream.hh>
#include <utility/io/ozstream.hh>
#include <utility/io/mpistream.hh>
#include <utility/string_util.hh>
#include <utility/file/FileName.hh>
#include <utility/file/file_sys_util.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/FArray3D.hh>
#include <ObjexxFCL/format.hh>
#include <utility/excn/Exceptions.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/after_opts.hh>
#include <basic/options/option_macros.hh>
#include <basic/basic.hh>
#include <basic/database/open.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <fstream>
#include <iostream>
#include <cmath>
#include <sstream>
#include <string>
#include <queue>
#include <numeric/xyzMatrix.hh>
#include <numeric/xyzVector.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/xyzVector.io.hh>
#include <numeric/random/random.hh>
#include <numeric/NumericTraits.hh>
#include <numeric/fourier/FFT.hh>
#include <numeric/constants.hh>
#include <numeric/model_quality/rms.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::cryst

Functions
core::Size	protocols::cryst::get_nres_asu (core::pose::Pose const &pose)
core::Real	protocols::cryst::crystRMSfast (core::pose::Pose &pose_native, core::pose::Pose &pose_decoy)
core::Real	protocols::cryst::crystRMS (core::pose::Pose &pose_native, core::pose::Pose &pose_decoy, bool allatom, int native_cdist, int decoy_cdist)