| create_jump_fragments(int const orientation, int const pleating, bool bWithTorsion, core::fragment::FragDataOPs &) const override | protocols::jumping::PairingLibrary | virtual |
| generate_jump_frags(core::scoring::dssp::PairingsList const &pairings, core::kinematics::MoveMap const &mm, bool bWithTorsion, core::fragment::FragSet &frags_accumulator) override | protocols::jumping::PairingLibrary | virtual |
| get_random_beta_sheet_jump(int const orientation, int const pleating) const | protocols::jumping::PairingLibrary | |
| get_random_tmh_jump(int const orientation, int const pos1, int const pos2) const | protocols::jumping::PairingLibrary | |
| num_of_pairings_ | protocols::jumping::PairingLibrary | private |
| PairingLibrary() | protocols::jumping::PairingLibrary | inline |
| pairings_ | protocols::jumping::PairingLibrary | private |
| PairingTemplateList typedef | protocols::jumping::PairingLibrary | |
| PairingTemplateMap typedef | protocols::jumping::PairingLibrary | |
| read_from_file(std::string const &fn) | protocols::jumping::PairingLibrary | |
| read_from_file_no_filters(std::string const &fn) | protocols::jumping::PairingLibrary | |
| set_tmh_jump(core::pose::Pose pose, int const jump_number, int const orientation, int const pos1, int const pos2) const | protocols::jumping::PairingLibrary | |
| size() const | protocols::jumping::PairingLibrary | inline |
| ~BasePairingLibrary() override | protocols::jumping::BasePairingLibrary | |