| add_enzyme_template(core::Size index, utility::tag::TagCOP tag) | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | private |
| algorithm_inputs() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| algorithm_inputs_ | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | private |
| allowed_res_name3s(core::Size which_cstres) const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| allowed_restypes(core::Size which_cstres) const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| allowed_seqpos() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| allowed_seqpos_ | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | private |
| constraints() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| constraints_ | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | private |
| create_exgs() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| diversify_backbone_only_rotamers(utility::vector1< core::conformation::ResidueCOP > &rotamers) const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| downstream_res() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| enz_cst_template_res(core::Size template_res) const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| enz_template_res_ | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | private |
| HTReal typedef | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| index() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| index_ | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | private |
| initialize_from_tag(utility::tag::TagCOP tag) | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| inverse_rotamers_against_residue(core::Size const target_template, core::conformation::ResidueCOP target_conf) const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| inverse_rotamers_against_residue(core::conformation::Residue const &target_conf, core::chemical::ResidueTypeCOP invrot_restype, utility::vector1< core::Size > const &target_ats, utility::vector1< core::Size > const &invrot_ats, bool const flip_exgs_upstream_downstream_samples, bool const backbone_interaction) const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| is_backbone(core::Size which_cstres) const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| is_covalent() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| is_covalent_ | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | private |
| MatchConstraintFileInfo(core::Size index, core::chemical::ResidueTypeSetCOP restype_set) | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| native() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| native_ | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | private |
| num_enz_cst_template_res() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| process_algorithm_info(std::string const &tag, utility::io::izstream &data) | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | protected |
| process_data() | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| read_data(utility::io::izstream &data) | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| restype_set_ | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | private |
| return_complex_type_for_MatcherConstraint(utility::tag::XMLSchemaSimpleSubelementList &ssl, utility::tag::XMLSchemaDefinition &xsd) | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | static |
| template_atom_inds(core::Size which_cstres, core::Size which_template_atom, core::chemical::ResidueType const &restype) const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
| upstream_res() const | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | inline |
| ~MatchConstraintFileInfo() override | protocols::toolbox::match_enzdes_util::MatchConstraintFileInfo | |
1.8.7