| add_loop_size(core::Size const loop_size) | protocols::loophash::LoopHashDiversifier | |
| all_structs_ | protocols::loophash::LoopHashDiversifier | private |
| apply(core::pose::Pose &pose) override | protocols::loophash::LoopHashDiversifier | virtual |
| cenfilter(protocols::filters::FilterOP cenfilter) | protocols::loophash::LoopHashDiversifier | |
| cenfilter_ | protocols::loophash::LoopHashDiversifier | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const override | protocols::loophash::LoopHashDiversifier | inlinevirtual |
| create() | protocols::moves::Mover | virtual |
| diversify_loop_only_ | protocols::loophash::LoopHashDiversifier | private |
| filter_by_phipsi_ | protocols::loophash::LoopHashDiversifier | private |
| fresh_instance() const override | protocols::loophash::LoopHashDiversifier | inlinevirtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const override | protocols::loophash::LoopHashDiversifier | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_self_ptr() const | protocols::moves::Mover | inline |
| get_self_ptr() | protocols::moves::Mover | inline |
| get_self_weak_ptr() const | protocols::moves::Mover | inline |
| get_self_weak_ptr() | protocols::moves::Mover | inline |
| get_type() const | protocols::moves::Mover | inline |
| ideal_ | protocols::loophash::LoopHashDiversifier | private |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| library_ | protocols::loophash::LoopHashDiversifier | private |
| loop_sizes() const | protocols::loophash::LoopHashDiversifier | |
| loop_sizes_ | protocols::loophash::LoopHashDiversifier | private |
| LoopHashDiversifier() | protocols::loophash::LoopHashDiversifier | |
| LoopHashDiversifier(LoopHashLibraryOP library, core::Real min_inter_ss_bbrms, core::Real max_inter_ss_bbrms, core::Real min_intra_ss_bbrms, core::Real max_intra_ss_bbrms, core::Real min_rms, core::Real max_rms, std::string const &start_res, std::string const &stop_res, core::Size window_size, core::Size max_radius, core::Size max_struct, core::Size num_iterations, core::Size num_try_div, bool diversify_loop_only, bool ideal, bool filter_by_phipsi, protocols::filters::FilterOP cenfilter, protocols::filters::FilterOP ranking_cenfilter, core::scoring::ScoreFunctionOP scorefxn_cen_cst, core::scoring::ScoreFunctionOP scorefxn_rama_cst) | protocols::loophash::LoopHashDiversifier | |
| max_inter_ss_bbrms() const | protocols::loophash::LoopHashDiversifier | |
| max_inter_ss_bbrms(core::Real const max_inter_ss_bbrms) | protocols::loophash::LoopHashDiversifier | |
| max_inter_ss_bbrms_ | protocols::loophash::LoopHashDiversifier | private |
| max_intra_ss_bbrms() const | protocols::loophash::LoopHashDiversifier | |
| max_intra_ss_bbrms(core::Real const max_intra_ss_bbrms) | protocols::loophash::LoopHashDiversifier | |
| max_intra_ss_bbrms_ | protocols::loophash::LoopHashDiversifier | private |
| max_radius_ | protocols::loophash::LoopHashDiversifier | private |
| max_rms() const | protocols::loophash::LoopHashDiversifier | |
| max_rms(core::Real const max_rms) | protocols::loophash::LoopHashDiversifier | |
| max_rms_ | protocols::loophash::LoopHashDiversifier | private |
| max_struct_ | protocols::loophash::LoopHashDiversifier | private |
| min_inter_ss_bbrms() const | protocols::loophash::LoopHashDiversifier | |
| min_inter_ss_bbrms(core::Real const min_inter_ss_bbrms) | protocols::loophash::LoopHashDiversifier | |
| min_inter_ss_bbrms_ | protocols::loophash::LoopHashDiversifier | private |
| min_intra_ss_bbrms() const | protocols::loophash::LoopHashDiversifier | |
| min_intra_ss_bbrms(core::Real const min_intra_ss_bbrms) | protocols::loophash::LoopHashDiversifier | |
| min_intra_ss_bbrms_ | protocols::loophash::LoopHashDiversifier | private |
| min_rms() const | protocols::loophash::LoopHashDiversifier | |
| min_rms(core::Real const min_rms) | protocols::loophash::LoopHashDiversifier | |
| min_rms_ | protocols::loophash::LoopHashDiversifier | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| mover_name() | protocols::loophash::LoopHashDiversifier | static |
| name() | protocols::moves::Mover | inlinestatic |
| num_iterations() const | protocols::loophash::LoopHashDiversifier | |
| num_iterations(core::Size const num_iterations) | protocols::loophash::LoopHashDiversifier | |
| num_iterations_ | protocols::loophash::LoopHashDiversifier | private |
| num_try_div() const | protocols::loophash::LoopHashDiversifier | |
| num_try_div(core::Size const num_try_div) | protocols::loophash::LoopHashDiversifier | |
| num_try_div_ | protocols::loophash::LoopHashDiversifier | private |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &) override | protocols::loophash::LoopHashDiversifier | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| provide_citation_info(basic::citation_manager::CitationCollectionList &) const | protocols::moves::Mover | virtual |
| provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | protocols::loophash::LoopHashDiversifier | static |
| ranking_cenfilter(protocols::filters::FilterOP filter) | protocols::loophash::LoopHashDiversifier | inline |
| ranking_cenfilter() const | protocols::loophash::LoopHashDiversifier | inline |
| ranking_cenfilter_ | protocols::loophash::LoopHashDiversifier | private |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| scorefxn_cen_cst_ | protocols::loophash::LoopHashDiversifier | private |
| scorefxn_rama_cst_ | protocols::loophash::LoopHashDiversifier | private |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| start_res_ | protocols::loophash::LoopHashDiversifier | private |
| stop_res_ | protocols::loophash::LoopHashDiversifier | private |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| type() const | protocols::moves::Mover | inline |
| window_size_ | protocols::loophash::LoopHashDiversifier | private |
| ~LoopHashDiversifier() override | protocols::loophash::LoopHashDiversifier | |
1.8.7