| apply(core::pose::Pose &pose) override | protocols::indel::IndelOptimizationMover | virtual |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const | protocols::moves::Mover | virtual |
| create() | protocols::moves::Mover | virtual |
| dump_initial_results() | protocols::indel::IndelOptimizationMover | inline |
| dump_initial_results(bool i) | protocols::indel::IndelOptimizationMover | inline |
| dump_initial_results_ | protocols::indel::IndelOptimizationMover | private |
| end_res() | protocols::indel::IndelOptimizationMover | inline |
| end_res(core::Size i) | protocols::indel::IndelOptimizationMover | inline |
| end_res_ | protocols::indel::IndelOptimizationMover | private |
| frag_files() | protocols::indel::IndelOptimizationMover | inline |
| frag_files(bool i) | protocols::indel::IndelOptimizationMover | inline |
| frag_files_ | protocols::indel::IndelOptimizationMover | private |
| fresh_instance() const | protocols::moves::Mover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const override | protocols::indel::IndelOptimizationMover | inlinevirtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_self_ptr() const | protocols::moves::Mover | inline |
| get_self_ptr() | protocols::moves::Mover | inline |
| get_self_weak_ptr() const | protocols::moves::Mover | inline |
| get_self_weak_ptr() | protocols::moves::Mover | inline |
| get_type() const | protocols::moves::Mover | inline |
| IndelOptimizationMover(core::Size start_res, core::Size end_res, core::Size loop_length, std::string const &remodel, std::string const &intermedrelax, std::string const &refine, std::string const &relax, bool frag_files, core::Size num_to_dock, bool dump_initial_results) | protocols::indel::IndelOptimizationMover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| intermedrelax() | protocols::indel::IndelOptimizationMover | inline |
| intermedrelax(std::string i) | protocols::indel::IndelOptimizationMover | inline |
| intermedrelax_ | protocols::indel::IndelOptimizationMover | private |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| loop_length() | protocols::indel::IndelOptimizationMover | inline |
| loop_length(core::Size i) | protocols::indel::IndelOptimizationMover | inline |
| loop_length_ | protocols::indel::IndelOptimizationMover | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| num_to_dock() | protocols::indel::IndelOptimizationMover | inline |
| num_to_dock(core::Size i) | protocols::indel::IndelOptimizationMover | inline |
| num_to_dock_ | protocols::indel::IndelOptimizationMover | private |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| provide_citation_info(basic::citation_manager::CitationCollectionList &) const | protocols::moves::Mover | virtual |
| refine() | protocols::indel::IndelOptimizationMover | inline |
| refine(std::string i) | protocols::indel::IndelOptimizationMover | inline |
| refine_ | protocols::indel::IndelOptimizationMover | private |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| relax() | protocols::indel::IndelOptimizationMover | inline |
| relax(std::string i) | protocols::indel::IndelOptimizationMover | inline |
| relax_ | protocols::indel::IndelOptimizationMover | private |
| remodel() | protocols::indel::IndelOptimizationMover | inline |
| remodel(std::string i) | protocols::indel::IndelOptimizationMover | inline |
| remodel_ | protocols::indel::IndelOptimizationMover | private |
| reset_status() | protocols::moves::Mover | |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| start_res() | protocols::indel::IndelOptimizationMover | inline |
| start_res(core::Size i) | protocols::indel::IndelOptimizationMover | inline |
| start_res_ | protocols::indel::IndelOptimizationMover | private |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| type() const | protocols::moves::Mover | inline |
| ~IndelOptimizationMover() override=default | protocols::indel::IndelOptimizationMover | |
1.8.7