RNA_FA_ElecEnergy.cc File Reference

Electrostatics energy method for RNA class implementation. More...

#include <core/energy_methods/RNA_FA_ElecEnergy.hh>
#include <core/energy_methods/RNA_FA_ElecEnergyCreator.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/EnergyGraph.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/etable/count_pair/CountPairFunction.hh>
#include <core/scoring/etable/count_pair/CountPairFactory.hh>
#include <core/scoring/etable/count_pair/types.hh>
#include <core/kinematics/MinimizerMapBase.hh>
#include <core/scoring/NeighborList.tmpl.hh>
#include <core/scoring/MinimizationData.hh>
#include <core/scoring/ResidueNeighborList.hh>
#include <core/scoring/DerivVectorPair.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/conformation/RotamerSetBase.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <core/id/AtomID.hh>
#include <utility/vector1.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::energy_methods

Functions
bool	core::energy_methods::is_phosphate_2 (conformation::Residue const &rsd, Size const i)
bool	core::energy_methods::is_sugar_2 (conformation::Residue const &rsd, Size const i)
bool	core::energy_methods::is_base_2 (conformation::Residue const &rsd, Size const i)
RNAAtomType	core::energy_methods::assign_rna_atom_type (conformation::Residue const &rsd, Size const i)
Real	core::energy_methods::rna_elec_weight (core::scoring::EnergyMap const &weights, bool const b1, bool const s1, bool const p1, bool const b2, bool const s2, bool const p2)

Detailed Description

Electrostatics energy method for RNA class implementation.

Author

Rhiju Das Edited by Joseph Yesselm (9.6.13)