protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser Member List

This is the complete list of members for protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser, including all inherited members.

apply(core::pose::Pose &pose) override	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	virtual
apply_solutions(core::pose::Pose &pose)	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
atom_ids_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
b_ang_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
b_len_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
chainbreak_suite_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
choose_best_solution_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
choose_best_solution_based_on_score_function(core::scoring::ScoreFunctionOP scorefxn)	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser
choose_least_perturb_solution()	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser
choose_least_perturb_solution_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	virtual
close_at_cutpoint(core::pose::Pose &pose)	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
create()	protocols::moves::Mover	virtual
dof_ids_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
figure_out_dof_ids_and_offsets(core::pose::Pose const &pose, utility::vector1< core::Real > const &dt_ang)	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
figure_out_offset(core::pose::Pose const &pose, core::id::DOF_ID const &dof_id, core::Real const &original_torsion_value, utility::vector1< core::Real > &offset_save)	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
fill_chainTORS(core::pose::Pose const &pose, utility::vector1< core::id::NamedAtomID > const &atom_ids, utility::vector1< utility::fixedsizearray1< core::Real, 3 > > &atoms, utility::vector1< core::Real > &dt_ang, utility::vector1< core::Real > &db_ang, utility::vector1< core::Real > &db_len) const	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
fill_solution(core::pose::Pose &pose, core::Size const n) const	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_all_solutions(core::pose::Pose &pose, utility::vector1< core::pose::PoseOP > &pose_list)	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_torsions(core::Size const n)	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser
get_torsions_for_all_solutions()	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
moving_suite_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
name()	protocols::moves::Mover	inlinestatic
nsol()	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	inline
nsol_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
offset_save_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
output_chainTORS(utility::vector1< core::Real > const &dt_ang, utility::vector1< core::Real > const &db_ang, utility::vector1< core::Real > const &db_len) const	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
RNA_AnalyticLoopCloser(core::Size const moving_suite, core::Size const chainbreak_suite)	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser
scorefxn_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Strings typedef	protocols::moves::Mover
t_ang_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
verbose_	protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser	private