protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter Member List

This is the complete list of members for protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter, including all inherited members.

apply(core::pose::Pose &pose) override	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	virtual
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
create()	protocols::moves::Mover	virtual
finalize(core::scoring::ScoreFunctionCOP denovo_scorefxn)	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_output_jump_RT(core::pose::PoseCOP pose) const	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
get_output_jump_stub_stub(core::pose::Pose const &pose, core::kinematics::Stub &stub1, core::kinematics::Stub &stub2) const	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
initialize(core::pose::PoseCOP align_pose)	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
jump_histogram() const	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	inline
jump_histogram_	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
jump_histogram_bin_width_	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
jump_histogram_max_	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
jump_histogram_min_	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
name()	protocols::moves::Mover	inlinestatic
options_	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
output_jump_information(core::pose::Pose const &pose)	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
output_running_info(core::Size const &r, core::Size const &i, core::pose::Pose &pose, core::scoring::ScoreFunctionCOP working_denovo_scorefxn)	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter
output_stub_stub_type_	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
reference_RT_	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
RNA_FragmentMonteCarloOutputter(core::import_pose::options::RNA_FragmentMonteCarloOptionsCOP options, core::pose::PoseCOP align_pose)	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter
running_score_output_	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	private
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_jump_histogram(numeric::MathNTensorOP< core::Size, 6 > setting)	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter	inline
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
~RNA_FragmentMonteCarloOutputter() override	protocols::rna::denovo::output::RNA_FragmentMonteCarloOutputter