protocols::loophash::LoopHashLibrary Member List

This is the complete list of members for protocols::loophash::LoopHashLibrary, including all inherited members.

apply(core::pose::Pose &pose) override	protocols::loophash::LoopHashLibrary	virtual
apply_random(core::pose::Pose &pose, core::Size &fir, core::Size &fjr, core::Real min_rms, core::Real max_rms)	protocols::loophash::LoopHashLibrary
assigned_num_	protocols::loophash::LoopHashLibrary	private
assigned_string_	protocols::loophash::LoopHashLibrary	private
backbone_database() const	protocols::loophash::LoopHashLibrary	inline
bbdb_	protocols::loophash::LoopHashLibrary	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::loophash::LoopHashLibrary	inlinevirtual
create()	protocols::moves::Mover	virtual
create_db()	protocols::loophash::LoopHashLibrary
create_db_	protocols::loophash::LoopHashLibrary	private
db_path_	protocols::loophash::LoopHashLibrary	private
delete_db()	protocols::loophash::LoopHashLibrary
do_sanity_check_	protocols::loophash::LoopHashLibrary	private
extra_	protocols::loophash::LoopHashLibrary	private
extract_data_from_pose(core::pose::Pose &pose, core::Size nres, protocols::frag_picker::VallChunkOP chunk=nullptr)	protocols::loophash::LoopHashLibrary
extract_data_from_pose(core::pose::Pose &pose)	protocols::loophash::LoopHashLibrary
fresh_instance() const override	protocols::loophash::LoopHashLibrary	inlinevirtual
get_additional_output()	protocols::moves::Mover	virtual
get_all(core::pose::Pose &pose, std::vector< core::io::silent::SilentStructOP > &lib_structs, core::Size start_res=1, core::Size stop_res=0, core::Real min_bbrms=0.0, core::Real max_bbrms=100000.0, core::Real min_rms=0.0, core::Real max_rms=100.0)	protocols::loophash::LoopHashLibrary
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_extra() const	protocols::loophash::LoopHashLibrary	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::loophash::LoopHashLibrary	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
gethash(core::Size size) const	protocols::loophash::LoopHashLibrary
gethash(core::Size size)	protocols::loophash::LoopHashLibrary
graft_loop(const core::pose::Pose &src_pose, core::pose::Pose &tgt_pose, protocols::loops::Loop myloop)	protocols::loophash::LoopHashLibrary
hash_	protocols::loophash::LoopHashLibrary	private
hash_sizes() const	protocols::loophash::LoopHashLibrary	inline
hash_sizes_	protocols::loophash::LoopHashLibrary	private
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
load_db()	protocols::loophash::LoopHashLibrary
load_mergeddb()	protocols::loophash::LoopHashLibrary
loopdb_range() const	protocols::loophash::LoopHashLibrary	inline
loopdb_range_	protocols::loophash::LoopHashLibrary	private
LoopHashLibrary(const utility::vector1< core::Size > &init_sizes=utility::vector1< core::Size >(), const core::Size num_partitions=1, const core::Size assigned_num=0)	protocols::loophash::LoopHashLibrary
mem_foot_print() const	protocols::loophash::LoopHashLibrary
merge(LoopHashLibraryOP second_lib, utility::vector1< core::Real > rms_cutoffs)	protocols::loophash::LoopHashLibrary
merge_bbdb(const BackboneDB &second_bbdb, core::Size &index_offset)	protocols::loophash::LoopHashLibrary
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
name()	protocols::moves::Mover	inlinestatic
num_partitions_	protocols::loophash::LoopHashLibrary	private
options2_	protocols::loophash::LoopHashLibrary	private
options_	protocols::loophash::LoopHashLibrary	private
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
save_db() const	protocols::loophash::LoopHashLibrary
scorefxn_cen_cst_	protocols::loophash::LoopHashLibrary	private
scorefxn_rama_cst_	protocols::loophash::LoopHashLibrary	private
set_create_db(bool setting=true)	protocols::loophash::LoopHashLibrary	inline
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_db_path(std::string setting)	protocols::loophash::LoopHashLibrary	inline
set_default_score_functions()	protocols::loophash::LoopHashLibrary
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_type(std::string const &setting)	protocols::moves::Mover	inline
setup_hash_maps()	protocols::loophash::LoopHashLibrary
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
sort()	protocols::loophash::LoopHashLibrary
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
test_loop_sample(core::pose::Pose &pose, core::Size nres)	protocols::loophash::LoopHashLibrary
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
test_saving_library(core::pose::Pose, core::Size ir, bool deposit)	protocols::loophash::LoopHashLibrary
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline