| add_evaluation(evaluation::PoseEvaluatorOP) | protocols::jd2::JobOutputter | |
| affixed_numbered_name(JobCOP job) | protocols::jd2::JobOutputter | protected |
| call_output_observers(core::pose::Pose const &pose, JobOP job) const | protocols::jd2::JobOutputter | |
| clear_evaluators() | protocols::jd2::JobOutputter | |
| dump_energies_file(core::io::StructFileRepCOP sfr, std::string const &parent_filename) | protocols::jd2::mmtfJobOutputter | private |
| dump_extra_data_file(JobCOP job, std::string const &parent_filename) | protocols::jd2::mmtfJobOutputter | private |
| dump_pose(JobCOP job, core::pose::Pose const &pose, utility::io::ozstream &out, std::string const &filename="") override | protocols::jd2::mmtfJobOutputter | protectedvirtual |
| evaluate(core::pose::Pose &pose, std::string tag, core::io::silent::SilentStruct &pss) const | protocols::jd2::JobOutputter | |
| evaluators() const | protocols::jd2::JobOutputter | |
| extended_name(JobCOP job, std::string const &suffix="") | protocols::jd2::wwPDBJobOutputter | protectedvirtual |
| extension_ | protocols::jd2::mmtfJobOutputter | private |
| extract_data_from_Job(JobCOP job) | protocols::jd2::wwPDBJobOutputter | protectedvirtual |
| file(JobCOP job, std::string const &data) override | protocols::jd2::FileJobOutputter | virtual |
| FileJobOutputter() | protocols::jd2::FileJobOutputter | |
| filename(JobCOP) const | protocols::jd2::JobOutputter | inlinevirtual |
| final_pose(JobOP job, core::pose::Pose const &pose, std::string const &tag) override | protocols::jd2::wwPDBJobOutputter | virtual |
| flush() | protocols::jd2::JobOutputter | virtual |
| get_extension() | protocols::jd2::wwPDBJobOutputter | protected |
| get_path() | protocols::jd2::wwPDBJobOutputter | protected |
| job_has_completed(JobCOP job) override | protocols::jd2::wwPDBJobOutputter | virtual |
| JobOutputter() | protocols::jd2::JobOutputter | |
| mmtfJobOutputter() | protocols::jd2::mmtfJobOutputter | |
| other_pose(JobOP job, core::pose::Pose const &pose, std::string const &tag, int copy_count=-1, bool score_only=false) override | protocols::jd2::wwPDBJobOutputter | virtual |
| output_name(JobCOP job) override | protocols::jd2::wwPDBJobOutputter | virtual |
| parent typedef | protocols::jd2::mmtfJobOutputter | |
| scorefile(JobCOP job, core::pose::Pose const &pose, std::string prefix_tag="", std::string suffix_tag="", std::string scorefile="") | protocols::jd2::FileJobOutputter | protectedvirtual |
| scorefile_name() | protocols::jd2::FileJobOutputter | inline |
| set_defaults() | protocols::jd2::FileJobOutputter | |
| set_evaluators(evaluation::PoseEvaluators const &) | protocols::jd2::JobOutputter | |
| set_extension(std::string const &extension) | protocols::jd2::wwPDBJobOutputter | protected |
| set_path(std::string const &path) | protocols::jd2::wwPDBJobOutputter | protected |
| starting_pose(core::pose::Pose const &) | protocols::jd2::JobOutputter | virtual |
| write_scorefile() const | protocols::jd2::FileJobOutputter | inline |
| wwPDBJobOutputter() | protocols::jd2::wwPDBJobOutputter | |
| ~FileJobOutputter() override | protocols::jd2::FileJobOutputter | |
| ~JobOutputter() override | protocols::jd2::JobOutputter | |
| ~mmtfJobOutputter() override | protocols::jd2::mmtfJobOutputter | |
| ~wwPDBJobOutputter() override | protocols::jd2::wwPDBJobOutputter | |
1.8.7