| apply(core::pose::Pose &p) override | protocols::simple_moves::ShakeStructureMover | virtual |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const | protocols::moves::Mover | virtual |
| create() | protocols::moves::Mover | virtual |
| create_ensemble(core::pose::Pose &p, core::scoring::ScoreFunction &s) | protocols::simple_moves::ShakeStructureMover | protected |
| fresh_instance() const | protocols::moves::Mover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_ensemble_ca_rmsd() | protocols::simple_moves::ShakeStructureMover | |
| get_ensemble_diversity() | protocols::simple_moves::ShakeStructureMover | |
| get_harmonic_ca_cst_std_dev() | protocols::simple_moves::ShakeStructureMover | |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_mc_temperature() | protocols::simple_moves::ShakeStructureMover | |
| get_min_cst() | protocols::simple_moves::ShakeStructureMover | |
| get_min_scorefunction() | protocols::simple_moves::ShakeStructureMover | |
| get_minimize_with_cst() | protocols::simple_moves::ShakeStructureMover | |
| get_name() const override | protocols::symmetry::SymShakeStructureMover | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_nrounds() | protocols::simple_moves::ShakeStructureMover | |
| get_ramp_fa_rep() | protocols::simple_moves::ShakeStructureMover | |
| get_rmsd_target_tolerance() | protocols::simple_moves::ShakeStructureMover | |
| get_sc_min() | protocols::simple_moves::ShakeStructureMover | |
| get_scorefunction() | protocols::simple_moves::ShakeStructureMover | |
| get_scorefunction_initialized() | protocols::simple_moves::ShakeStructureMover | |
| get_self_ptr() const | protocols::moves::Mover | inline |
| get_self_ptr() | protocols::moves::Mover | inline |
| get_self_weak_ptr() const | protocols::moves::Mover | inline |
| get_self_weak_ptr() | protocols::moves::Mover | inline |
| get_skip_low_temp_phase() | protocols::simple_moves::ShakeStructureMover | |
| get_testing_phase() | protocols::simple_moves::ShakeStructureMover | |
| get_type() const | protocols::moves::Mover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| minimize_with_constraints(core::pose::Pose &p, core::scoring::ScoreFunction &s) override | protocols::symmetry::SymShakeStructureMover | virtual |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| provide_citation_info(basic::citation_manager::CitationCollectionList &) const | protocols::moves::Mover | virtual |
| reduce_fa_rep(float fraction_fa_rep, core::scoring::ScoreFunction &s) | protocols::symmetry::SymShakeStructureMover | |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| run_mc(core::pose::Pose &p, core::scoring::ScoreFunction &s, core::Real temperature) override | protocols::symmetry::SymShakeStructureMover | virtual |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
| set_ensemble_diversity(core::Real ca_rmsd) | protocols::simple_moves::ShakeStructureMover | |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_is_properly_initialized(bool truefalse) | protocols::simple_moves::ShakeStructureMover | protected |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_mc_temp(core::Real temperature) | protocols::simple_moves::ShakeStructureMover | protected |
| set_mc_temperature(core::Real temp) | protocols::simple_moves::ShakeStructureMover | |
| set_min_scorefunction(core::scoring::ScoreFunctionOP scfxn) | protocols::simple_moves::ShakeStructureMover | protected |
| set_minimize_with_cst(bool truefalse) | protocols::simple_moves::ShakeStructureMover | |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_nrounds(int new_nrounds) | protocols::simple_moves::ShakeStructureMover | |
| set_ramp_fa_rep(bool truefalse) | protocols::simple_moves::ShakeStructureMover | |
| set_rmsd_target_tolerance(core::Real tol) | protocols::simple_moves::ShakeStructureMover | |
| set_sc_min(bool truefalse) | protocols::simple_moves::ShakeStructureMover | |
| set_scorefunction(core::scoring::ScoreFunctionOP s) | protocols::simple_moves::ShakeStructureMover | |
| set_skip_low_temp_phase(bool truefalse) | protocols::simple_moves::ShakeStructureMover | |
| set_temp_based_on_ens_diversity(core::pose::Pose &p, core::scoring::ScoreFunction &s) | protocols::simple_moves::ShakeStructureMover | protected |
| set_testing_phase(bool truefalse) | protocols::simple_moves::ShakeStructureMover | protected |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| setup_ca_constraints(core::pose::Pose &pose, core::scoring::ScoreFunction &s, float const CA_cutoff, float const cst_tol) | protocols::simple_moves::ShakeStructureMover | protectedvirtual |
| setup_for_run(core::pose::Pose &p) override | protocols::symmetry::SymShakeStructureMover | virtual |
| setup_movers(protocols::simple_moves::SmallMoverOP gsmall, protocols::simple_moves::ShearMoverOP gshear, core::Real small_H_angle_max, core::Real small_E_angle_max, core::Real small_L_angle_max, core::Real shear_H_angle_max, core::Real shear_E_angle_max, core::Real shear_L_angle_max) | protocols::simple_moves::ShakeStructureMover | protected |
| ShakeStructureMover() | protocols::simple_moves::ShakeStructureMover | |
| ShakeStructureMover(core::scoring::ScoreFunctionOP s) | protocols::simple_moves::ShakeStructureMover | |
| ShakeStructureMover(core::scoring::ScoreFunctionOP s, core::Real temperature) | protocols::simple_moves::ShakeStructureMover | |
| ShakeStructureMover(core::scoring::ScoreFunctionOP s, core::Real ens_diversity, core::Real ens_div_tolerance) | protocols::simple_moves::ShakeStructureMover | |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| SymShakeStructureMover() | protocols::symmetry::SymShakeStructureMover | |
| SymShakeStructureMover(core::scoring::ScoreFunctionOP s) | protocols::symmetry::SymShakeStructureMover | |
| SymShakeStructureMover(core::scoring::ScoreFunctionOP s, core::Real temperature) | protocols::symmetry::SymShakeStructureMover | |
| SymShakeStructureMover(core::scoring::ScoreFunctionOP s, core::Real ens_diversity, core::Real ens_div_tolerance) | protocols::symmetry::SymShakeStructureMover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| type() const | protocols::moves::Mover | inline |
| ~ShakeStructureMover() override | protocols::simple_moves::ShakeStructureMover | |
| ~SymShakeStructureMover() override | protocols::symmetry::SymShakeStructureMover | |
1.8.7