RmsdFilter.cc File Reference

rmsd filtering More...

#include <protocols/protein_interface_design/filters/RmsdFilter.hh>
#include <protocols/protein_interface_design/filters/RmsdFilterCreator.hh>
#include <protocols/filters/Filter.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/datacache/cacheable_observers.hh>
#include <core/conformation/Conformation.hh>
#include <utility>
#include <utility/tag/Tag.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/ref_pose.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/rms_util.tmpl.hh>
#include <numeric/model_quality/rms.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <core/pose/selection.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <core/import_pose/import_pose.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/select/residue_selector/ResidueIndexSelector.hh>
#include <core/select/residue_selector/ResidueSpanSelector.hh>
#include <core/select/residue_selector/ChainSelector.hh>
#include <core/select/residue_selector/TrueResidueSelector.hh>
#include <core/select/residue_selector/util.hh>
#include <core/id/AtomID.hh>
#include <core/id/AtomID_Map.hh>
#include <core/id/NamedAtomID.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <algorithm>
#include <list>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <basic/Tracer.hh>
#include <utility/io/izstream.hh>
#include <protocols/toolbox/superimpose.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/filters/filter_schemas.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::protein_interface_design
	protocols::protein_interface_design::filters

Functions
static basic::Tracer	protocols::protein_interface_design::filters::TR ("protocols.protein_interface_design.filters.RmsdFilter")
core::Real	protocols::protein_interface_design::filters::atom_distance (core::conformation::Residue const &r1, std::string const &a1, core::conformation::Residue const &r2, std::string const &a2)
core::Real	protocols::protein_interface_design::filters::res_rmsd (utility::vector1< core::Size > const pose_res_for_rmsd, utility::vector1< core::Size > const template_res_for_rmsd, core::pose::Pose const &copy_pose, core::pose::Pose const &template_pose)
utility::vector1 < numeric::xyzVector < core::Real > >	protocols::protein_interface_design::filters::Ca_coords (core::pose::Pose const &pose, utility::vector1< core::Size > const &positions)

Detailed Description

rmsd filtering

Author

Jacob Corn (jecor.nosp@m.n@u..nosp@m.washi.nosp@m.ngto.nosp@m.n.edu)