#include <TemplateJumpSetup.hh>

Inheritance diagram for protocols::abinitio::FixTemplateJumpSetup:

Public Member Functions
	FixTemplateJumpSetup (TemplatesCOP templates, core::fragment::SecondaryStructureCOP secstruct, PairingStatisticsCOP, core::scoring::dssp::PairingList const &, jumping::BaseJumpSetupOP jump_def)

	~FixTemplateJumpSetup () override

	FixTemplateJumpSetup (TemplateJumpSetup const &templ, jumping::BaseJumpSetupOP jump_def)

jumping::JumpSample	create_jump_sample () const override

Public Member Functions inherited from protocols::abinitio::TemplateJumpSetup
	TemplateJumpSetup (TemplatesCOP templates, core::fragment::SecondaryStructureCOP secstruct, PairingStatisticsCOP, core::scoring::dssp::PairingList const &helix_pairings)

	~TemplateJumpSetup () override

std::string	type_name () const override

jumping::JumpSample	clean_jumps (jumping::JumpSample const &) const override
	take from a given JumpSample only those Jumps, which could also have been created by create_jump_sample() More...

core::fragment::FragSetOP	generate_jump_frags (jumping::JumpSample const &, core::kinematics::MoveMap const &) const override
	returns an ordered FragSet that is compatible with the JumpSample default: generate jumps from ss-library according to JumpSample More...

bool	is_helix_jump (core::scoring::dssp::Pairing const &p) const

Public Member Functions inherited from protocols::jumping::BaseJumpSetup
	~BaseJumpSetup () override
	Automatically generated virtual destructor for class deriving directly from VirtualBase. More...

Constructor & Destructor Documentation

protocols::abinitio::FixTemplateJumpSetup::FixTemplateJumpSetup	(	TemplatesCOP	templates,
		core::fragment::SecondaryStructureCOP	secstruct,
		PairingStatisticsCOP	strand_stats,
		core::scoring::dssp::PairingList const &	helix_pairings,
		jumping::BaseJumpSetupOP	jump_def
	)