RNA_DeNovoPoseInitializer.cc File Reference

#include <protocols/rna/denovo/RNA_DeNovoPoseInitializer.hh>
#include <core/pose/rna/secstruct_legacy/RNA_SecStructLegacyInfo.hh>
#include <core/import_pose/RNA_JumpMover.hh>
#include <core/import_pose/libraries/RNA_LibraryManager.hh>
#include <core/import_pose/RNA_DeNovoParameters.hh>
#include <core/import_pose/RNA_BasePairHandler.hh>
#include <protocols/rna/denovo/util.hh>
#include <core/pose/toolbox/AtomLevelDomainMap.hh>
#include <core/import_pose/libraries/RNA_ChunkLibrary.hh>
#include <core/import_pose/libraries/ChunkSet.hh>
#include <core/import_pose/import_pose.hh>
#include <protocols/stepwise/monte_carlo/util.hh>
#include <core/pose/Pose.hh>
#include <core/chemical/ResidueProperties.hh>
#include <core/pose/copydofs/util.hh>
#include <core/pose/MiniPose.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/variant_util.hh>
#include <core/pose/rna/util.hh>
#include <core/pose/full_model_info/FullModelInfo.hh>
#include <core/pose/full_model_info/util.hh>
#include <core/pose/full_model_info/FullModelParameters.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/VariantType.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/id/TorsionID.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/AtomTree.hh>
#include <core/kinematics/tree/Atom.hh>
#include <core/chemical/rna/util.hh>
#include <core/scoring/rna/RNA_ScoringInfo.hh>
#include <core/scoring/rna/RNA_LowResolutionPotential.hh>
#include <core/scoring/ScoreType.hh>
#include <core/id/AtomID.hh>
#include <core/id/NamedAtomID.hh>
#include <basic/options/option.hh>
#include <ObjexxFCL/format.hh>
#include <utility/io/izstream.hh>
#include <utility/exit.hh>
#include <utility/tools/make_vector1.hh>
#include <numeric/random/random.hh>
#include <core/types.hh>
#include <basic/Tracer.hh>
#include <fstream>
#include <iostream>
#include <list>
#include <utility/vector1.hh>
#include <utility/stream_util.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::rna
	protocols::rna::denovo

Functions
static basic::Tracer	protocols::rna::denovo::TR ("protocols.rna.denovo.setup.RNA_DeNovoPoseInitializer")