Rosetta  2021.16
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protocols::stepwise::modeler::rna::phosphate::PhosphateMover Member List

This is the complete list of members for protocols::stepwise::modeler::rna::phosphate::PhosphateMover, including all inherited members.

apply(core::pose::Pose &pose_to_visualize) overrideprotocols::stepwise::modeler::rna::phosphate::PhosphateMovervirtual
apply_Aform_torsions_to_five_prime_phosphate(core::pose::Pose &pose, core::Size const sample_res) const protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
apply_Aform_torsions_to_three_prime_phosphate(core::pose::Pose &pose, core::Size const sample_res) const protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
check_phosphate_contacts_donor(core::pose::Pose &pose) const protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() const protocols::moves::Movervirtual
create()protocols::moves::Movervirtual
do_screening_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
donor_atom_xyz_list_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
donor_base_atom_xyz_list_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
force_phosphate_instantiation() const protocols::stepwise::modeler::rna::phosphate::PhosphateMoverinline
force_phosphate_instantiation_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
fresh_instance() const protocols::moves::Movervirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const overrideprotocols::stepwise::modeler::rna::phosphate::PhosphateMovervirtual
get_native_pose() const protocols::moves::Mover
get_self_ptr() const protocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() const protocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() const protocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
initialize_variables()protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
instantiated_phosphate() const protocols::stepwise::modeler::rna::phosphate::PhosphateMoverinline
instantiated_phosphate_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
neighbor_copy_dofs_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
number_score_calls_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
op1_atom_idx_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
op2_atom_idx_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)protocols::moves::Movervirtual
pass_clash_check(std::string const &atom_name, core::Size const n, core::pose::Pose &pose)protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
phosphate_move_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
PhosphateMover(core::Size const sample_res, PhosphateTerminus which_terminus_, core::scoring::ScoreFunctionCOP scorefxn)protocols::stepwise::modeler::rna::phosphate::PhosphateMover
PhosphateMover(PhosphateMove const &phosphate_move, core::scoring::ScoreFunctionCOP scorefxn)protocols::stepwise::modeler::rna::phosphate::PhosphateMover
Pose typedefprotocols::moves::Mover
pose_free_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const protocols::moves::Movervirtual
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
reset_status()protocols::moves::Mover
scorefxn_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
screen_five_prime_phosphate(core::pose::Pose &pose)protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
screen_for_donor_contact_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
screen_phosphate(core::pose::Pose &pose)protocols::stepwise::modeler::rna::phosphate::PhosphateMover
screen_three_prime_phosphate(core::pose::Pose &pose)protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_force_phosphate_instantiation(bool const &setting)protocols::stepwise::modeler::rna::phosphate::PhosphateMoverinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_type(std::string const &setting)protocols::moves::Moverinline
setup_atom_and_neighbor_list(core::pose::Pose &pose)protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
setup_variants_and_free_pose_for_five_prime_phosphate(core::pose::Pose &pose)protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
setup_variants_and_free_pose_for_terminal_phosphate(core::pose::Pose &pose)protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
setup_variants_and_free_pose_for_three_prime_phosphate(core::pose::Pose &pose)protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
show(std::ostream &output=std::cout) const protocols::moves::Movervirtual
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
torsion_info_protocols::stepwise::modeler::rna::phosphate::PhosphateMoverprivate
type(const std::string &type_in)protocols::moves::Moverinline
type() const protocols::moves::Moverinline
~PhosphateMover() overrideprotocols::stepwise::modeler::rna::phosphate::PhosphateMover