protocols::constraints_additional::SequenceCouplingConstraint Member List

This is the complete list of members for protocols::constraints_additional::SequenceCouplingConstraint, including all inherited members.

atom(core::Size const ) const override	protocols::constraints_additional::SequenceCouplingConstraint	inlinevirtual
AtomID typedef	core::scoring::constraints::Constraint
choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &)	core::scoring::constraints::Constraint	virtual
clone() const override	protocols::constraints_additional::SequenceCouplingConstraint	virtual
core::scoring::constraints::Constraint::clone(func::FuncOP) const	core::scoring::constraints::Constraint	virtual
Conformation typedef	protocols::constraints_additional::SequenceCouplingConstraint
Constraint(ScoreType const &t)	core::scoring::constraints::Constraint
ConstraintOP typedef	protocols::constraints_additional::SequenceCouplingConstraint
dist(core::scoring::func::XYZ_Func const &) const override	protocols::constraints_additional::SequenceCouplingConstraint	inlinevirtual
core::scoring::constraints::Constraint::dist(core::pose::Pose const &) const	core::scoring::constraints::Constraint	virtual
effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const	core::scoring::constraints::Constraint	virtual
EnergyMap typedef	protocols::constraints_additional::SequenceCouplingConstraint
fill_f1_f2(AtomID const &, XYZ_Func const &, core::Vector &, core::Vector &, EnergyMap const &) const override	protocols::constraints_additional::SequenceCouplingConstraint
core::scoring::constraints::Constraint::fill_f1_f2(AtomID const &atom, core::scoring::func::XYZ_Func const &xyz_func, Vector &F1, Vector &F2, EnergyMap const &weights) const =0	core::scoring::constraints::Constraint	pure virtual
FuncFactory typedef	protocols::constraints_additional::SequenceCouplingConstraint
get_func() const	core::scoring::constraints::Constraint	virtual
natoms() const override	protocols::constraints_additional::SequenceCouplingConstraint	inlinevirtual
operator!=(Constraint const &other) const	core::scoring::constraints::Constraint
operator==(core::scoring::constraints::Constraint const &other) const override	protocols::constraints_additional::SequenceCouplingConstraint	virtual
Pose typedef	protocols::constraints_additional::SequenceCouplingConstraint
read_constraint(std::istream &, core::pose::Pose const &)	core::scoring::constraints::Constraint	virtual
read_data(std::istream &)	core::scoring::constraints::Constraint	virtual
read_def(std::istream &, Pose const &, FuncFactory const &) override	protocols::constraints_additional::SequenceCouplingConstraint	virtual
remap_resid(core::id::SequenceMapping const &) const	core::scoring::constraints::Constraint	virtual
remapped_clone(pose::Pose const &, pose::Pose const &, id::SequenceMappingCOP map) const	core::scoring::constraints::Constraint	virtual
residues() const override	protocols::constraints_additional::SequenceCouplingConstraint	virtual
same_type_as_me(core::scoring::constraints::Constraint const &other) const override	protocols::constraints_additional::SequenceCouplingConstraint	virtual
score(XYZ_Func const &, EnergyMap const &, EnergyMap &) const override	protocols::constraints_additional::SequenceCouplingConstraint	virtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose) const	core::scoring::constraints::Constraint	virtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose, EnergyMap const &weights) const	core::scoring::constraints::Constraint	virtual
score_type() const	core::scoring::constraints::Constraint	inline
seqpos1() const	protocols::constraints_additional::SequenceCouplingConstraint	inline
seqpos1_	protocols::constraints_additional::SequenceCouplingConstraint	private
seqpos2() const	protocols::constraints_additional::SequenceCouplingConstraint	inline
seqpos2_	protocols::constraints_additional::SequenceCouplingConstraint	private
sequence_coupling()	protocols::constraints_additional::SequenceCouplingConstraint
sequence_coupling() const	protocols::constraints_additional::SequenceCouplingConstraint
sequence_coupling_	protocols::constraints_additional::SequenceCouplingConstraint	private
SequenceCoupling typedef	protocols::constraints_additional::SequenceCouplingConstraint
SequenceCouplingConstraint()	protocols::constraints_additional::SequenceCouplingConstraint
SequenceCouplingConstraint(Pose const &, core::Size, core::Size, SequenceCouplingOP profile=nullptr)	protocols::constraints_additional::SequenceCouplingConstraint
SequenceCouplingConstraint(core::Size, core::Size, SequenceCouplingOP profile=nullptr)	protocols::constraints_additional::SequenceCouplingConstraint
SequenceCouplingCOP typedef	protocols::constraints_additional::SequenceCouplingConstraint
SequenceCouplingOP typedef	protocols::constraints_additional::SequenceCouplingConstraint
SequenceMapping typedef	protocols::constraints_additional::SequenceCouplingConstraint
set_sequence_coupling(SequenceCouplingOP)	protocols::constraints_additional::SequenceCouplingConstraint
setup_for_derivatives(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	virtual
setup_for_scoring(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	virtual
show(std::ostream &out) const override	protocols::constraints_additional::SequenceCouplingConstraint	virtual
show_def(std::ostream &, Pose const &) const override	protocols::constraints_additional::SequenceCouplingConstraint	virtual
show_violations(std::ostream &out, pose::Pose const &, Size, Real threshold=1) const	core::scoring::constraints::Constraint	virtual
steal_def(pose::Pose const &)	core::scoring::constraints::Constraint	virtual
to_string() const	core::scoring::constraints::Constraint
type() const override	protocols::constraints_additional::SequenceCouplingConstraint	inlinevirtual
XYZ_Func typedef	protocols::constraints_additional::SequenceCouplingConstraint
~Constraint() override	core::scoring::constraints::Constraint
~SequenceCouplingConstraint() override	protocols::constraints_additional::SequenceCouplingConstraint